Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02028 ATGAGTTGCTGCGGAGGAAGGGAGGAAGAGATCCCTGGCCTACCTCCAAACCAATCCGCTGCACCACCTGGAGGGGTTAATGCATATGGTGGTGGCGGAAGAGGAGGAGAGAGAGGAGATCCAAGGGGCAATGCTGCCAAGTCAGGCGGTCCACAGAAGGATTTATCAATTGACGCCCCAGCTATTTCACTGGAGGAGCTAAATAGTGTAACTCGCAACTTTGGTTCCGATGCTTTGGTTGGAGAAGGTTCATATGGACGGGTTTTCTACGCAAAGTTGAGAAATGGTCAGGCCGCGGCCATCAAGAAGCTGGATAACGGTTCTTCCCCAGAACCAGACTCTGATTTTACGACACAGTTATCTCTAGTTTCAAGACTAAAGAATGAGCATTTTTTGGAGTTGATGGGATATTGTCTGGAGGGAACCAACAGAATTTTGGTTTATCAGTATGCAAGGAAGGGTTCTCTGCATGATATAGTACATGGAAGGAAAGGTGTACAAGGGGCCGAGCCTGGTCCAACGCTAAGCTGGAACCAGAGAGTAAAAATTGCATTCGGTGCAGCCAAAGGCCTTGAGTTTCTTCATGAGAAGTGTCAACCGTCCATAGTTCATCGTGACGTGAGATCAAGCAATGTGTTATTGTTTGATGACTTCGAGACCAAGCTTGCCGATTTCAACTTGACAAACCAGAGTTCTGACACAGCAGCTCGGCTTCATTCAACTAGAGTCTTGGGAACTTTTGGGTATCATGCTCCAGAGTATGCCATGACTGGCCAGATTACCCATAAAAGTGATGTCTACAGTTTTGGAGTGGTGCTCTTAGAACTCCTGACAGGAAGAAAGCCAGTAGACCACACAATGCCCAAGGGACAACAAAGTCTGGTAACGTGGGCAACTCCAAGGTTGAGTGAGGACAAAGTGAAACAATGTGTGGATCCAAAGCTAAACAATGAATACCCACCCAAGGCCGTTGCTAAGTTGGCAGCAGTCGCAGCACTCTGTGTTCAGTATGAAGCTGACTTCCGGCCAAATATGACGATTGTGGTTAAAGCTCTTCAGCCACTTCTCAATACAAAGCCGGCTGGCCCTGAATCTGGTCCTTGA 1104 0.4774 MSCCGGREEEIPGLPPNQSAAPPGGVNAYGGGGRGGERGDPRGNAAKSGGPQKDLSIDAPAISLEELNSVTRNFGSDALVGEGSYGRVFYAKLRNGQAAAIKKLDNGSSPEPDSDFTTQLSLVSRLKNEHFLELMGYCLEGTNRILVYQYARKGSLHDIVHGRKGVQGAEPGPTLSWNQRVKIAFGAAKGLEFLHEKCQPSIVHRDVRSSNVLLFDDFETKLADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITHKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNEYPPKAVAKLAAVAALCVQYEADFRPNMTIVVKALQPLLNTKPAGPESGP 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02028 367 ProSitePatterns Tyrosine protein kinases specific active-site signature. 202 214 IPR008266 GO:0004672|GO:0006468
Accr5g02028 367 FunFam Pti1 kinase-like protein 50 150 - -
Accr5g02028 367 ProSiteProfiles Protein kinase domain profile. 74 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g02028 367 Gene3D Transferase(Phosphotransferase) domain 1 152 362 - -
Accr5g02028 367 FunFam PTI1-like tyrosine-protein kinase 3 152 361 - -
Accr5g02028 367 Pfam Protein tyrosine and serine/threonine kinase 79 352 IPR001245 GO:0004672|GO:0006468
Accr5g02028 367 ProSitePatterns Protein kinases ATP-binding region signature. 80 103 IPR017441 GO:0005524
Accr5g02028 367 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 41 360 - -
Accr5g02028 367 Gene3D Phosphorylase Kinase; domain 1 50 150 - -
Accr5g02028 367 MobiDBLite consensus disorder prediction 1 56 - -
Accr5g02028 367 SMART tyrkin_6 74 352 IPR020635 GO:0004713|GO:0006468
Accr5g02028 367 SUPERFAMILY Protein kinase-like (PK-like) 56 352 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02028 Accr-Chr5 46633885 46635736 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02028 38 366 Receptor kinase-like Gene Family AT3G58690 43.713 7.65e-86 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Accr5g02028 PK_Tyr_Ser-Thr 2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02028 - - pvu:PHAVU_007G261200g 578.17