Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02016 ATGTTTCATAGGTCTCAATTACTAGCAGTAATCTTCAGTGTTATTGCCCTCGTTCATGCTAGCTGCCTTTCTTTCAAATTCCCAAACTTCCAGCCCTCGGATGAACCAAGTTTAATTTTGAGCAAGAACTCAAAACTATACCTGGAAGCCATCCAGGTAACCCCTGATATTCGTGGTGAGATCGCCGATTATTCTGGCAGAGCTTTCTACGGAAAGCCGTACAGACTATGGACCAAGAGCCAAAACCGAACTGCTGAGTTTAATACCACCTTCGTGCTCAATATCAAGAATGAAACCTCCCCAGGAGGCGAAGGCTTGGCTTTTATATTAACCGGAGATACCACTCTTCCAGAAAACAGTGCCGGAGAATGGCTTGGAATCGTAAATGCTACAACCAATGGCACTTCTCACCCTGGGATTTTGGCGGTAGAGTTTGACACAAGACAAAACTCTGATGAAGATGGCCCCAACAACCATCTTGGCATCAACATCAATAGTATCAACTCCATGATGCGCGTTTCATTACAAGACTTCGGAATCACTCTTTCATCGGGTATAGATGTCATGATCAGAGTTCAGTATGCTGAAGATGTAATATCTGTATTTGGTTCCATGAATAGAAGTGCGGACATGAAGACGCTGCTCATTTCCCCACCTCTCAATCTATCTTCATATCTGCCAGAAGAGATTTTCCTGGGTTTCTCTGCTTCAACAAGTAATTATACAGAGCTGAACTGTGTAAGAGCTTGGGAATTCTACGGTACCCAAATTGCAGGTGATGGTCCAAAGCTGTTGTGGGTTTGGATCACAGTTCCTGCAACACTGGTCATCTTAGGTGGGGTGATCTTTTTCTTGCTCTGGCAAAGGAAACGCCGTATGGAGATGTCAGAGGAAGCATATCCAAGAATAGAGGATCAGATTCAACATAGTTCTATGGCCCCAAAGAAGTTTCGACTTGGAGAAATCAGAAAAGCAACAGGCAGATTCAGCCCTCAAAACAAGCTTGGGGAAGGTGGTTTTGGAACAGTCTACAAGGGGTTCTTGAGAGGCAAAGAGGTAGCTGTGAAAAGAGTCTCCAAGGATTCACGTCAAGGCAAGCAAGAGTTCGTAGCAGAAGTGACAATAATAGGAAGCCTTCATCACAGAAACCTGGTGAAATTGATGGGGTGGTGCTATGAGAGCCGAGAACTAGTCCTTGTCTACGAATTCATGCCTAATGGGGGCCTAGACAACTACCTGTATGATGATGATGAGAAGCTTGGCTGCGAAGATGGATTAATACTCAGCTGGAAAACAAGACACAGTGCTATATATGGTGTGGCTCAAGCACTAGATTATCTGCATAACGGATGTGAGAAAAAGGTGCTTCACAGGGACATAAAAGCCAGCAACATATTGTTGGACTCAGACTTCACGGCCAAGTTGGGAGACTTTGGTCTGGCTCGTACCATTCAGAAGAGAGATGAAACTCACCACTCAACAAAAGCAATTGCAGGAACACCTGGCTACATGGCTCCGGAAACATTCCTTACAGGGAGGGCAACAGTGGAGACAGATGTGTATGCATTTGGTGTTGTTATGTTACAAGTTGTGTGTGGAATGAGGAGAGGGAATCAGTATTCTCAGGCGGACGAGTATAATAATAACATTGTGCATTGGGTGTGGGAGCTTTACGGGAAGGGAAAGTTACTCGCTGCAGTGGATAGCAGAATAGTGACGGAAATAGAAGAAGAACGTGTGGAAGTTGTGCTTGTTTTGGGTTTAGCTTGTTGTCATCCAAACCCACATCACAGGCCTTCCATGAGGTCTGTTATGCAGGTTCTTACTGGAGAAGTAGCTCCACCAGAGGTACCTAAGGAAAGACCTGCTTTTGTGTGGCCTGCCTTACCTCCTTCCTTCACTCATGGTGCTGATAGCTCTCTCACAGCAAGTCAGCTCGTTCCCTTCTTAGGAGTTGGGGAGGTCACTGGCAGATGA 1977 0.4537 MFHRSQLLAVIFSVIALVHASCLSFKFPNFQPSDEPSLILSKNSKLYLEAIQVTPDIRGEIADYSGRAFYGKPYRLWTKSQNRTAEFNTTFVLNIKNETSPGGEGLAFILTGDTTLPENSAGEWLGIVNATTNGTSHPGILAVEFDTRQNSDEDGPNNHLGININSINSMMRVSLQDFGITLSSGIDVMIRVQYAEDVISVFGSMNRSADMKTLLISPPLNLSSYLPEEIFLGFSASTSNYTELNCVRAWEFYGTQIAGDGPKLLWVWITVPATLVILGGVIFFLLWQRKRRMEMSEEAYPRIEDQIQHSSMAPKKFRLGEIRKATGRFSPQNKLGEGGFGTVYKGFLRGKEVAVKRVSKDSRQGKQEFVAEVTIIGSLHHRNLVKLMGWCYESRELVLVYEFMPNGGLDNYLYDDDEKLGCEDGLILSWKTRHSAIYGVAQALDYLHNGCEKKVLHRDIKASNILLDSDFTAKLGDFGLARTIQKRDETHHSTKAIAGTPGYMAPETFLTGRATVETDVYAFGVVMLQVVCGMRRGNQYSQADEYNNNIVHWVWELYGKGKLLAAVDSRIVTEIEEERVEVVLVLGLACCHPNPHHRPSMRSVMQVLTGEVAPPEVPKERPAFVWPALPPSFTHGADSSLTASQLVPFLGVGEVTGR 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02016 658 Gene3D - 21 259 - -
Accr5g02016 658 ProSiteProfiles Protein kinase domain profile. 329 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g02016 658 Pfam Protein kinase domain 332 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g02016 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Accr5g02016 658 ProSitePatterns Protein kinases ATP-binding region signature. 335 356 IPR017441 GO:0005524
Accr5g02016 658 FunFam probable L-type lectin-domain containing receptor kinase S.5 404 614 - -
Accr5g02016 658 Gene3D Phosphorylase Kinase; domain 1 314 403 - -
Accr5g02016 658 CDD lectin_legume_LecRK_Arcelin_ConA 23 252 IPR001220 GO:0030246
Accr5g02016 658 Pfam Legume lectin domain 23 258 IPR001220 GO:0030246
Accr5g02016 658 FunFam Probable L-type lectin-domain containing receptor kinase S.5 314 403 - -
Accr5g02016 658 SUPERFAMILY Concanavalin A-like lectins/glucanases 21 257 IPR013320 -
Accr5g02016 658 SMART serkin_6 329 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g02016 658 PANTHER - 52 615 - -
Accr5g02016 658 ProSitePatterns Legume lectins beta-chain signature. 141 147 IPR019825 -
Accr5g02016 658 FunFam Probable L-type lectin-domain containing receptor kinase S.5 22 261 - -
Accr5g02016 658 SUPERFAMILY Protein kinase-like (PK-like) 310 608 IPR011009 -
Accr5g02016 658 Gene3D Transferase(Phosphotransferase) domain 1 404 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02016 Accr-Chr5 46512149 46514125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02016 63 622 Receptor kinase-like Gene Family AT5G10530 38.031 1.17e-116 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Accr5g02016 Pkinase 1.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02016 - - gmx:100785031 932.939