Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02013 ATGTTTTCGTGGTTGGCAAGGATAGTTTCAGCGTGCTTGAGGCCGGTCAGGTGGTATGCCCGCATGAACAAGGATGACGTGGATGATACTTCCTCGATTGAAGACACTCTGCTTTGGTATAAGGACCTCGAGAAACACTCGTGCGGCGAATTCTCTTATGCTGTGGTTCAGGCCAATGAAATTATCGAGGATCACAGCCAGGTCGAGACTGGCTCCGACGCTATGTTCATCGGCGTGTACGACGGCCATGGCGGTCCCGAGGCGTCTCGGTTCATCAGCGACCACCTCTTCCATCATCTAATGAGGATAGCTCGAGATAATGGTACTATATCTGAAGATATCCTGAGAGGTGCTGTTTCTGCGACTGAAGATGGATTTCTGACTTTTGTTCGAAGGAGTTATGGTATAAAGCCATTGATGGCGGCGATGGGTTCCTGTTGTCTGGCTGGTGTTATTTGGAAAGGGACATTATATTTGGCCAACCTTGGAGACTCTCGTGCTGTTATTGGTTCTGTAGATAGATCTAATAAGATCGTTGCTGAGCAGTTGACTAGAGAGCACAATGCTAGCAAAGAGGAGGTTCGACGTGAACTTAGGTCCTTGCATCCTGAAGATTCCCAGATTGTAGTCATGAAGCATGGAACTTGGCGCATTAAGGGCATCATCCAGGTATCTAGATCTATAGGAGATGCATATTTGAAAAGACCAGAGTTTTCTCTTGATCCTTCATTCCCACGATTCCACCTACCAGAACCTATCCGGCGTCCTGTGCTGACGGCCGAGCCGTCTATATGTTCAAGGGTCCTACAACCAAATGATAAATTCCTAATATTTGCATCTGATGGACTTTGGGAACACTTGACAAATAAGGAAGCTGCAGAGATCGTGCATAACAACCCCCGAACGGGGATAGCAAGGAGACTGCTTAAAGCCGCCCTGAACGAGGCGGCTAGGAAACGAGAAATGAGGTACAAAGATCTGCAGAAGGTTGAGAAGGGGATCAGGAGGTTCTTTCACGATGATATCACGGTTGTGGTGGTGTTCATCGACCACGAGCTGGTGGGGAAGAATGTTGCTGTACCAGAATTGTCCATCAGAGGCTTCGCTGACACGGTTGGTCCATCCAATTTTAAGGTCGTCCGGGATTGA 1149 0.4813 MFSWLARIVSACLRPVRWYARMNKDDVDDTSSIEDTLLWYKDLEKHSCGEFSYAVVQANEIIEDHSQVETGSDAMFIGVYDGHGGPEASRFISDHLFHHLMRIARDNGTISEDILRGAVSATEDGFLTFVRRSYGIKPLMAAMGSCCLAGVIWKGTLYLANLGDSRAVIGSVDRSNKIVAEQLTREHNASKEEVRRELRSLHPEDSQIVVMKHGTWRIKGIIQVSRSIGDAYLKRPEFSLDPSFPRFHLPEPIRRPVLTAEPSICSRVLQPNDKFLIFASDGLWEHLTNKEAAEIVHNNPRTGIARRLLKAALNEAARKREMRYKDLQKVEKGIRRFFHDDITVVVVFIDHELVGKNVAVPELSIRGFADTVGPSNFKVVRD 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02013 382 ProSitePatterns PPM-type phosphatase domain signature. 76 84 IPR000222 GO:0043169
Accr5g02013 382 Gene3D - 27 358 IPR036457 -
Accr5g02013 382 Coils Coil 180 200 - -
Accr5g02013 382 SMART PP2C_4 44 347 IPR001932 -
Accr5g02013 382 ProSiteProfiles PPM-type phosphatase domain profile. 47 349 IPR001932 -
Accr5g02013 382 FunFam Probable protein phosphatase 2C 42 41 357 - -
Accr5g02013 382 Pfam Protein phosphatase 2C 67 318 IPR001932 -
Accr5g02013 382 PANTHER PROTEIN PHOSPHATASE 41 347 IPR015655 GO:0004722|GO:0006470
Accr5g02013 382 SUPERFAMILY PP2C-like 53 350 IPR036457 -
Accr5g02013 382 CDD PP2Cc 51 349 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02013 Accr-Chr5 46497428 46499663 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02013 1 379 PP2C-type Phosphatase Gene Family AT5G06750 69.231 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02013 K01102 - gmx:100778238 680.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02535 2 60814021 60816669 Accr5g02013 5 46497428 46499663 CCT
Accr5g02013 5 46497428 46499663 Accr5g02013 5 46497428 46499663 ECH