Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02002 ATGAATGAGAACAGAGTCGATTGGCAGGGGCAGATTCAACAGAGGCAGGGACGAGATGGGAATTTCAATTCGGAGTCTGGTCATCTTTCTCGTCTATATTTTGATGTCAAACAGGCTTGGAATATTGGTGGTGGAGCTGAAGAGTCACCACAGTACATGGGCTCTGCAAAAACACCCACCACCATTATGGGTGGTTTTGAATCTCCAACTTCTGCTTTTTATGCAGCAGAACGATACATGGGGTTTCCACGATATCATTCCCAAGTTAACATAAACAACAACAACAGCAGTAATACTTTGGGCTCTCCATTTTCCAAGATTCATGATTTGGAACTCCCTTTGTATCAGCAATCCCCAAGGGAAAACACTTTCTTGGATCATTCGCCACACCAAGGTAACTCCAACGTCGAATTATCAAACACCTTGCGAGAATTTGACAACGCAGAAAAACCCAATAAAACACCAAGTGGGAATCTGTCAACCGGCAAGTTTCTTCCAATTGAACAGTTCATTGATGATGATTCTGCCTCAGTCAGGCGAAACCACACAGTTGGTTGCGGGTCTTATAATTTACCTGTTTCTTCTCATGTAAGCTTCTGTTCACAGCACGAGAAGATGTGTCCAACAGTTTCAGGAGCAAGTGTTACAACAAGTACTGGAAATGCTACTTCTACTGGTGGGGCAGGAATCTCAAGTAAATCACGTATAAGATGGACTCAGGATCTTCACGACAAATTTGTTGAATGTGTGAATCGCCTTGGGGGTGCTGAGAAGGCAACACCAAAAGCTATATTAAAGCTGATGGACACAGAGGGGCTGACCATCTTCCATGTAAAGAGTCATTTGCAGAAATACAGAATTGCAAAATACATGCCAGACCCAGCTCAACGGAAGTCTGACAAAAAAGCCCTTATAGACGATGTGCATCATATTGATGTCAAAACTGGCTTGCAAATCAGGGAGGCGCTTCAGCTACAGCTAGATGTTCAGAGGCGTCTCCATGAACAACTAGAGATTCAGAGAAGATTACAGCTTCGGATAGAAGAGCAGGGAAAGCAGCTGAAGATGATGTTTGACCAGCAGCAGAAAACATGTAATGGCTTCTCGGATTTAGGCAATACAGAAAATAATGATGCATCAGTTAGTCACAAAGAGGTTGAAGGGTCTGGAAATTCCTGCTTCCCTTCCAAGATAAGTTAG 1200 0.4333 MNENRVDWQGQIQQRQGRDGNFNSESGHLSRLYFDVKQAWNIGGGAEESPQYMGSAKTPTTIMGGFESPTSAFYAAERYMGFPRYHSQVNINNNNSSNTLGSPFSKIHDLELPLYQQSPRENTFLDHSPHQGNSNVELSNTLREFDNAEKPNKTPSGNLSTGKFLPIEQFIDDDSASVRRNHTVGCGSYNLPVSSHVSFCSQHEKMCPTVSGASVTTSTGNATSTGGAGISSKSRIRWTQDLHDKFVECVNRLGGAEKATPKAILKLMDTEGLTIFHVKSHLQKYRIAKYMPDPAQRKSDKKALIDDVHHIDVKTGLQIREALQLQLDVQRRLHEQLEIQRRLQLRIEEQGKQLKMMFDQQQKTCNGFSDLGNTENNDASVSHKEVEGSGNSCFPSKIS 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02002 399 Pfam MYB-CC type transfactor, LHEQLE motif 317 364 IPR025756 -
Accr5g02002 399 SUPERFAMILY Homeodomain-like 231 287 IPR009057 -
Accr5g02002 399 Coils Coil 320 340 - -
Accr5g02002 399 FunFam Myb family transcription factor 232 290 - -
Accr5g02002 399 Gene3D - 232 291 - -
Accr5g02002 399 MobiDBLite consensus disorder prediction 367 399 - -
Accr5g02002 399 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 230 290 IPR017930 -
Accr5g02002 399 Pfam Myb-like DNA-binding domain 237 286 IPR001005 -
Accr5g02002 399 NCBIfam myb-like DNA-binding domain, SHAQKYF class 233 288 IPR006447 GO:0003677
Accr5g02002 399 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 218 396 IPR044848 GO:0003700
Accr5g02002 399 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02002 Accr-Chr5 46407250 46409655 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02002 218 361 G2-like Transcription Factor Family AT4G28610 57.534 2.16e-52 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Accr5g02002 Myb_DNA-binding 2.5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02002 - - ccaj:109797364 387.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g02002 5 46407250 46409655 Accr5g02002 5 46407250 46409655 ECH