Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02000 ATGCATCACTATCTGCAGAACTTGACCACTGGATTAGGGAAATCCAGCACAGGAACTCACACTGTATTCAACGTGGGAGGACCAGGACACCAAAGTCTCGAAACCACCTTCAACAATATTATGTCACCTCTTCAAACCCCACCTGCTTCGTCTGCAACTAGCCGAGCCTGGACGAGCTTTCATCAACCAGCTGACCCTCCGATTGGATTTTGTTCTGATGAGTTCCTAGATCATTCGCCACTTCCATGCCATAAATCTTCTGGGGATCACTCCACCGTTTCCTCTATACAATATCATTCAACCTCCCCATTCAGTTTCACTAACTCCTTGCACTCCATCGTTGAATCTTTCTTGTCCAGTAGTTGCGAAGAAGAAAGCCTTTCTGATTCTTTGTACGCCCAATCACAACAAAATGAACTGCCGGCCGCTGAAGATGTTAAGCCCCTCCAAATTTCCTTTCAGAGGAATCCCCAGTCAGATAAGCAGCGTTCAAGAGCTTGTAGGAGCTCTCTAACTCGTAAAAGAAGAATAAGATGGACCAAGGATCTTCATGAGCCTTTTGTCACGATTGTTAATTGTCTCGGTGGTCCTCATAAGGCAAAGCCTAAGACCATACTACAGATGATGGATTCAGATGTGCTGACCATATCTCACATCAAAAGTCATTTGCAGAAATATCGATCTTCAACATGCGACCGGAAAGATTTGCAGGAGGAAAGATCTGGAGAAGGAAACCAACCAGAAGGAGTCTCGGAGATTCAACTTAAAATCCATAAGCAAATTGAGGAATCACTACAACTTCAACGTGAAGTCCAAAGGAGTATTCACGAGCAACAAGAGATACAACGAAATTTGCAACAGTTAATAAAACAGCATTGGAAGCAGCTCAAGATAATGTCAGATCCGCAAAATAATTGGTTGGAAGGACGGAGAGTTAAAAAAGGTCAATGA 951 0.4353 MHHYLQNLTTGLGKSSTGTHTVFNVGGPGHQSLETTFNNIMSPLQTPPASSATSRAWTSFHQPADPPIGFCSDEFLDHSPLPCHKSSGDHSTVSSIQYHSTSPFSFTNSLHSIVESFLSSSCEEESLSDSLYAQSQQNELPAAEDVKPLQISFQRNPQSDKQRSRACRSSLTRKRRIRWTKDLHEPFVTIVNCLGGPHKAKPKTILQMMDSDVLTISHIKSHLQKYRSSTCDRKDLQEERSGEGNQPEGVSEIQLKIHKQIEESLQLQREVQRSIHEQQEIQRNLQQLIKQHWKQLKIMSDPQNNWLEGRRVKKGQ 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02000 316 Gene3D - 173 230 - -
Accr5g02000 316 FunFam Two-component response regulator 170 233 - -
Accr5g02000 316 MobiDBLite consensus disorder prediction 228 242 - -
Accr5g02000 316 SUPERFAMILY Homeodomain-like 172 228 IPR009057 -
Accr5g02000 316 Coils Coil 271 291 - -
Accr5g02000 316 MobiDBLite consensus disorder prediction 228 251 - -
Accr5g02000 316 NCBIfam myb-like DNA-binding domain, SHAQKYF class 174 228 IPR006447 GO:0003677
Accr5g02000 316 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 158 301 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02000 Accr-Chr5 46401972 46404521 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02000 169 311 G2-like Transcription Factor Family AT3G04450 41.096 3.97e-29 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Accr5g02000 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02000 - - pcin:129304451 335.495