Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01999 ATGATCCACTTGCGAAAGCTTAGATCGAAATCCACTCTCCAACGGCCTCCTCCTCATTTTTTCCTTTGGTCCTTGGGACACCTAGTTGGGTCTATTGCTCAAAACTCTAGACCATACAGAGCTGAAAGAGTGGTTCCACCTGCCTGTTGTGAAGATCTTGACGAGGCTTTGGCTGCTGTTGGTCTCCCCATTAAGCTGGCCCTAAAAGAAGTGAAAGTTGCATTGCTGGAGTATCTGCATTCTACTAGAAGCATTCAGTACTTGGACGCAGATAACATGAGTAGAAACTCGCCTTACTTTCTTGAGGGGCTTTTGAAGCAAGTAGGCATGGCGGGTAACATTAGACGATCAGTTTCCAGGTATTTGTGTTATCACCCCATCAATGAATTTGAGCCCTTCTTCGAAAGCATTGGCTTAAAACCTTGTGAATATGCATCTCTTTTACCGAAAAATATGATTTATTTGAGCGATGACCAATTGTTGTTGGGGAACTATTATGCTCTTTGTAACTATGGGATTCCTCGTAATAAGATGGGAAAGATATATATGGAAGCAACTGAAGCGTTTCGCTATGAGCATGGAGTTTTATCATCAAAGCTTCGAGCTTATGAAAGATTGGGTCTTTGCCAGTCTACTCTGCTAAAAGTTATTGCTTCTAGCCCGTACCTTCTGGTTGGAGATTGTAACCCTGATTTTATCCAGGTTATAGAGAAGTTTAGGCATTATGTTGAGGATATTAATTGGATTGAGGGACAGTTATTGGGTGGGACTTCTTGCAATTGGAGCCAAATGCTTAGGCTCTTGTGCTTTTTTGGAAGGCTTTTGACTGAGCAACAGTTATCTGACATAATCAAGCAGCACCCTGACTTTTTCTTCGAGGGATCGGGAGGTAGTAGTACACTCTCCCTTATAGGCTTCCTGTTAAAATCTGGATTGTCAGTGGATCAAATATCCTTCGTATTTGCAAATTTTCCACCGATAAAAGTGAGCAAATTCCTTTCAAATTTGAGGCATTGTTATCTATTCTTAAGTGAAATTGAAATGGAGGCTGCAGAGATTGGGAAGATTTTCAGTTCTCACTCCTTAATGTTGGGTTCATTCACTTTGAAGAAAACCAACAGTTTACTTTCGAACTTGAATGTTGGGAAGAAGCGACTTCGGATGCTCATACAGGATAATCCTCTGGAATTGAAGAATTGGGAATTTGGAAGAAGAGTGAGGCCTTTGCCAGGCACTGACGAAGAGAAAATATCCCGTTTGCGGAAGAGAGAGTTCCTGTTGAGCTTGGGATATGGTGAGGACTCTAAAGAGATGAAAGAAGCATTTAAGGTGTTTAGAGGTAAGGGAGCAGAACTCCAAGAGAGGTTCGACTGTATTGTTCAAGCTGGGTTAGATCCTCAAAACGTGAAGGAAATAGTTAAAGTTTCCCCTCAGATTCTTAACATGAGAACAAATGTAATCAACCAGAAAATTGACTATCTTGTAAACGAACTGGGATATCCCATATCATCTTTAATCAACTTCCCATCTTTTCTTTCCTACAGAATTGAAAGAGTCCAGCTTAGGTTATCATTCTATAAGTGGCTTGTGGACCAGGGATGTGCTGATCCCAATCTTTCTTTAAGCACTGTAGTTTCATGCATAGAGGACTTATTTGTACAACAGTATGTAAATCGCCATCCAGATGGCCCTAAAGTTTGGCAGGATTTGAAGAATAAAGTTTGA 1725 0.4093 MIHLRKLRSKSTLQRPPPHFFLWSLGHLVGSIAQNSRPYRAERVVPPACCEDLDEALAAVGLPIKLALKEVKVALLEYLHSTRSIQYLDADNMSRNSPYFLEGLLKQVGMAGNIRRSVSRYLCYHPINEFEPFFESIGLKPCEYASLLPKNMIYLSDDQLLLGNYYALCNYGIPRNKMGKIYMEATEAFRYEHGVLSSKLRAYERLGLCQSTLLKVIASSPYLLVGDCNPDFIQVIEKFRHYVEDINWIEGQLLGGTSCNWSQMLRLLCFFGRLLTEQQLSDIIKQHPDFFFEGSGGSSTLSLIGFLLKSGLSVDQISFVFANFPPIKVSKFLSNLRHCYLFLSEIEMEAAEIGKIFSSHSLMLGSFTLKKTNSLLSNLNVGKKRLRMLIQDNPLELKNWEFGRRVRPLPGTDEEKISRLRKREFLLSLGYGEDSKEMKEAFKVFRGKGAELQERFDCIVQAGLDPQNVKEIVKVSPQILNMRTNVINQKIDYLVNELGYPISSLINFPSFLSYRIERVQLRLSFYKWLVDQGCADPNLSLSTVVSCIEDLFVQQYVNRHPDGPKVWQDLKNKV 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01999 574 PANTHER CGI-12 PROTEIN-RELATED 277 560 IPR003690 GO:0003690|GO:0006355
Accr5g01999 574 Gene3D Transcription termination factor 3, mitochondrial 298 569 IPR038538 -
Accr5g01999 574 Gene3D Transcription termination factor 3, mitochondrial 125 295 IPR038538 -
Accr5g01999 574 Pfam mTERF 276 395 IPR003690 GO:0003690|GO:0006355
Accr5g01999 574 Pfam mTERF 424 552 IPR003690 GO:0003690|GO:0006355
Accr5g01999 574 FunFam Transcription termination factor MTEF18, mitochondrial 303 570 - -
Accr5g01999 574 SMART mt_12 470 501 IPR003690 GO:0003690|GO:0006355
Accr5g01999 574 SMART mt_12 179 209 IPR003690 GO:0003690|GO:0006355
Accr5g01999 574 SMART mt_12 502 533 IPR003690 GO:0003690|GO:0006355
Accr5g01999 574 SMART mt_12 318 349 IPR003690 GO:0003690|GO:0006355
Accr5g01999 574 SMART mt_12 400 432 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01999 Accr-Chr5 46390258 46391982 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Accr5g01999 mTERF 1.3e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01999 - - pcin:129300550 909.057