Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01990 ATGTCTTCCAGTATCAACCAAACAACTACTCAACATGAACCTCTTCTACCTCCTCCACATCACCGTCACCACCACCACCACCAGCAACCACAACATGATCATCATGTTTCTTTTGGAATAATGCAATCTTCTTCTCCGTCGTCGACGTTTTCTGTCCCCGGAAACTACCTAAGCAAGGATTCAGGAGCTTATGATCTGGGAGATTTGGATCAAGCCCTTTTTCTCTATCTCGATGGACAACAAGACCCATCCAGTGTTCAACACCAGAGACCAGAGAACTCATCATCGTCAGAAATGAAGCCTCCCACACTCAACATGTTCCCATCCCAGCCCATGCATACACACCCGCCGTCAACCAAGGCTAGCATGGAAGTAGTTCCTCCTCAAGCCAGTGGTCCCAAAGGTCCATCAGAGCCCTCAATAGATTTGGCCAACCCACGAAACGAAGCCGTCTCAGCCCCTGAACCACCCAATTCCAAAATGGTCAAGCGAGAGAGCAATCGCAAGGGTCCAAGGCCAAGTTCTGAACAAGAAGTCCCCAAAACCCCAGATCCTAAGACTCTGAGGAGACTTGCTCAGAATAGAGAAGCAGCTAGGAAAAGCAGGCTCAGGAAAAAGGCATATGTTCAGCAGCTAGAGTCGAGTAGAATTAGGCTTAATCAACTGGAGCAAGAGCTGCATCGTGCTAGAGCTCAAGGAGTAATTTTAGCGGGAGGTGCAGCTTTGGGCGGAGAGCAAGGCCTTCCTATGGCTATGAGCAACATTAGCTCAGATGCAGCAATGTTCGACGTAGAATATGCGAGATGGCTAGAAGAGCACCATCGGGTAGTTTGCGAGCTAAGAGCAGCAGTTCAAGAGCACCTTCCAGAGAACGAGCTTCGTCTGTTTGTAGATAATTGGCTGGCACATTATGACCAATTAACGAATCTCAAGAGCGTAGTGGCCAAAACAGACGTTTTCCACATCGTGTCAGGCATGTGGAAGACCCCGGCTGAACGTTGCTTCATGTGGATTGGTGGTTTCAGGCCATCGGAACTCATTAAGATTATTGTGAGCCAAATTGAACCCCTGACGGAGCAGCAAATTCTGGGTATATATGGGTTGCAACAGTCAACGCAAGAGGCAGAAGAAGCTCTCTCCCAAGGGCTTGAGGCTCTCAATCAATCTCTCTCAGACACAATAACATCTGACTCACTGAGCTCTCCGCCCAACATGGCTAACTACATGGGACAGATGGCCATGGCCATCAATAAGCTCTCCACTCTAGAAGGTTTCGTGAGACAGGCAGATAATCTGAGGCAACAGACAATTCAGCGGGTGCTTGAGATACTGACGACACGGCAGGCGGCGAGGTGTATGCTGGCGATCGCCGAGTACTTCCACCGTCTGAGAGCTCTCAGTTCTCTGTGGATGGGACGACCTCGTCAAGATTAA 1434 0.4937 MSSSINQTTTQHEPLLPPPHHRHHHHHQQPQHDHHVSFGIMQSSSPSSTFSVPGNYLSKDSGAYDLGDLDQALFLYLDGQQDPSSVQHQRPENSSSSEMKPPTLNMFPSQPMHTHPPSTKASMEVVPPQASGPKGPSEPSIDLANPRNEAVSAPEPPNSKMVKRESNRKGPRPSSEQEVPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRIRLNQLEQELHRARAQGVILAGGAALGGEQGLPMAMSNISSDAAMFDVEYARWLEEHHRVVCELRAAVQEHLPENELRLFVDNWLAHYDQLTNLKSVVAKTDVFHIVSGMWKTPAERCFMWIGGFRPSELIKIIVSQIEPLTEQQILGIYGLQQSTQEAEEALSQGLEALNQSLSDTITSDSLSSPPNMANYMGQMAMAINKLSTLEGFVRQADNLRQQTIQRVLEILTTRQAARCMLAIAEYFHRLRALSSLWMGRPRQD 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01990 477 FunFam BZIP family transcription factor 185 234 - -
Accr5g01990 477 Coils Coil 205 232 - -
Accr5g01990 477 ProSiteProfiles DOG1 domain profile. 259 473 IPR025422 GO:0006351|GO:0043565
Accr5g01990 477 MobiDBLite consensus disorder prediction 161 175 - -
Accr5g01990 477 MobiDBLite consensus disorder prediction 1 53 - -
Accr5g01990 477 Pfam Seed dormancy control 277 352 IPR025422 GO:0006351|GO:0043565
Accr5g01990 477 CDD bZIP_HBP1b-like 186 238 - -
Accr5g01990 477 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 189 204 IPR004827 GO:0003700|GO:0006355
Accr5g01990 477 MobiDBLite consensus disorder prediction 82 189 - -
Accr5g01990 477 PANTHER TRANSCRIPTION FACTOR TGA9 104 476 - -
Accr5g01990 477 Gene3D - 185 234 - -
Accr5g01990 477 MobiDBLite consensus disorder prediction 35 53 - -
Accr5g01990 477 SUPERFAMILY Leucine zipper domain 186 228 IPR046347 GO:0003700|GO:0006355
Accr5g01990 477 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 184 228 IPR004827 GO:0003700|GO:0006355
Accr5g01990 477 SMART brlzneu 182 235 IPR004827 GO:0003700|GO:0006355
Accr5g01990 477 MobiDBLite consensus disorder prediction 82 117 - -
Accr5g01990 477 Pfam bZIP transcription factor 186 216 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01990 Accr-Chr5 46315508 46321149 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01990 54 477 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 63.170 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Accr5g01990 DOG1 8.5e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01990 K14431 - gmx:100799713 701.819