Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01988 ATGTCTTCCAGTATCAACCAAACAACTACTCAACATGAACCTCTTCTACCTCCTCCACATCACCGTCACCACCACCACCACCAGCAACCACAACATGATCATCATGTTTCTTTTGGAATAATGCAATCTTCTTCTCCGTCGTCGACGTTTTCTGTCCCCGGAAACTACCTAAGCAAGGATTCAGGAGCTTATGATCTGGGAGATTTGGATCAAGCCCTTTTTCTCTATCTCGATGGACAACAAGACCCATCCAGTGTTCAACACCAGAGACAGAACTCATCATCGTCAGAAATGAAGCCTCCCACACTCAACATGTTCCCATCCCAGCCCATGCATACACACCCGCCGTCAACCAAGGCTAGCATGGAAGTAGTTCCTCCTCAAGCCAGTGGTCCCAAAGGTCCATCAGAGCCCTCAATAGATTTGGCCAACCCACGAAACGAAGCCGTCTCAGCCCCTGAACCACCCAATTCCAAAATGGTCAAGCGAGAGAGCAATCGCAAGGGTCCAAGGCCAAGTTCTGAACAAGAAGTCCCCAAAACCCCAGATCCTAAGACTCTGAGGAGACTTGCTCAGAATAGAGAAGCAGCTAGGAAAAGCAGGCTCAGGAAAAAGGCATATGTTCAGCAGCTAGAGTCGAGTAGAATTAGGCTTAATCAACTGGAGCAAGAGCTGCATCGTGCTAGAGCTCAAGGAGTAATTTTAGCGGGAGGTGCAGCTTTGGGCGGAGAGCAAGGCCTTCCTATGGCTATGAGCAACATTAGCTCAGATGCAGCAATGTTCGACGTAGAATATGCGAGATGGCTAGAAGAGCACCATCGGGTAGTTTGCGAGCTAAGAGCAGCAGTTCAAGAGCACCTTCCAGAGAACGAGCTTCGTCTGTTTGTAGATAATTGGCTGGCACATTATGACCAATTAACGAATCTCAAGAGCGTAGTGGCCAAAACAGACGTTTTCCACATCGTGTCAGGCATGTGGAAGACCCCGGCTGAACGTTGCTTCATGTGGATTGGTGGTTTCAGGCCATCGGAACTCATTAAGATTATTGTGAGCCAAATTGAACCCCTGACGGAGCAGCAAATTCTGGGTATATATGGGTTGCAACAGTCAACGCAAGAGGCAGAAGAAGCTCTCTCCCAAGGGCTTGAGGCTCTCAATCAATCTCTCTCAGACACAATAACATCTGACTCACTGAGCTCTCCGCCCAACATGGCTAACTACATGGGACAGATGGCCATGGCCATCAATAAGCTCTCCACTCTAGAAGGTTTCGTGAGACAGGCAGATAATCTGAGGCAACAGACAATTCAGCGGGTGCTTGAGATACTGACGACACGGCAGGCGGCGAGGTGTATGCTGGCGATCGCCGAGTACTTCCACCGTCTGAGAGCTCTCAGTTCTCTGTGGATGGGACGACCTCGTCAAGATTAA 1431 0.4934 MSSSINQTTTQHEPLLPPPHHRHHHHHQQPQHDHHVSFGIMQSSSPSSTFSVPGNYLSKDSGAYDLGDLDQALFLYLDGQQDPSSVQHQRQNSSSSEMKPPTLNMFPSQPMHTHPPSTKASMEVVPPQASGPKGPSEPSIDLANPRNEAVSAPEPPNSKMVKRESNRKGPRPSSEQEVPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRIRLNQLEQELHRARAQGVILAGGAALGGEQGLPMAMSNISSDAAMFDVEYARWLEEHHRVVCELRAAVQEHLPENELRLFVDNWLAHYDQLTNLKSVVAKTDVFHIVSGMWKTPAERCFMWIGGFRPSELIKIIVSQIEPLTEQQILGIYGLQQSTQEAEEALSQGLEALNQSLSDTITSDSLSSPPNMANYMGQMAMAINKLSTLEGFVRQADNLRQQTIQRVLEILTTRQAARCMLAIAEYFHRLRALSSLWMGRPRQD 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01988 476 MobiDBLite consensus disorder prediction 82 116 - -
Accr5g01988 476 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 183 227 IPR004827 GO:0003700|GO:0006355
Accr5g01988 476 PANTHER TRANSCRIPTION FACTOR TGA9 96 475 - -
Accr5g01988 476 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 188 203 IPR004827 GO:0003700|GO:0006355
Accr5g01988 476 CDD bZIP_HBP1b-like 185 237 - -
Accr5g01988 476 MobiDBLite consensus disorder prediction 1 53 - -
Accr5g01988 476 FunFam BZIP family transcription factor 184 233 - -
Accr5g01988 476 SMART brlzneu 181 234 IPR004827 GO:0003700|GO:0006355
Accr5g01988 476 MobiDBLite consensus disorder prediction 160 174 - -
Accr5g01988 476 Gene3D - 184 233 - -
Accr5g01988 476 ProSiteProfiles DOG1 domain profile. 258 472 IPR025422 GO:0006351|GO:0043565
Accr5g01988 476 MobiDBLite consensus disorder prediction 35 53 - -
Accr5g01988 476 Coils Coil 204 231 - -
Accr5g01988 476 MobiDBLite consensus disorder prediction 82 188 - -
Accr5g01988 476 Pfam Seed dormancy control 276 351 IPR025422 GO:0006351|GO:0043565
Accr5g01988 476 SUPERFAMILY Leucine zipper domain 185 227 IPR046347 GO:0003700|GO:0006355
Accr5g01988 476 Pfam bZIP transcription factor 185 215 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01988 Accr-Chr5 46315508 46321149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01988 54 476 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 63.371 0.0 536
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Accr5g01988 DOG1 8.4e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01988 K14431 - gmx:100799713 706.827