Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01975 ATGGCTAAATTCTGTACATACCTGTTCCTTATTCTCTCTGTTACCTTCTCAACATTCAATCTTGGTTCATCTTCTTCTTCGTCAGAGGCAGATATCCTTCTCTCCTTCAAGGCCTCCATTGAAGACTCTAGGAAGGCTCTGTCTAGCTGGTCCAATACTACGTCCACTCACTATTGTAACTGGACTGGAATCGCCTGCTCTTCTCTCTCTGTCACTTCCATTAATCTTCAGAAATTGAACCTTTCTGGCGAACTCTCTCCTTCTATATGTGATCTTCAAAATCTGTCATTCCTCAATCTTGCTGATAATAAATTCAACCAGTCCATCCCTCTTCATCTTTCTCAGTGTAGTTCGTTGGAGACTTTGAATCTCAGTAATAATCTCATATGGGGAACCATCCCAATGCAGATTTCTCAGTTTGGTTCGTTAAAGGTGCTTGATTTCAGCAGAAATTACATAGAAGGGGATATCCCAGAGAGCATGGGCTTCCTCAAGAACCTCCAAGTTCTTAACATGGGAAGTAACCTGCTATCAGGTGATGTACCTGCTATCTTCATGAATTTAACTAAGCTTGCCGTTCTTGACTTGTCTGAAAATCCATACTTGGATAGTGAGATTCCTGAGAGTATAGGCGAACTTGGAAGTCTCAAGCAACTTCTGTTGCATAGTTCTGGTTTTCACGGGGAAATTCCGGATTCTTTTGCGAACCTGCGTAGTTTGACCCATTTAGACCTCTCTCAGAACAATCTAACAGGTGAGATTTCTCAGGGTCTGGTGTCTTCTCTCAAGAACCTGGTGTCTTTTGATGTTTCGCAGAACAAGCTTTCGGGGTCATTTCCAAATGGCATTTGTAATGCAAAAGGTCTCGTAAATCTCAGCCCCCATACAAATATTTTCAGTGGTTCAATACCCAACACCACTGGTGAATGTAAGAATCTTGAGAGATTTCAGGTTCAGAACAACGAGTTTGCTGGAGACTTCCCTTATTCATTATGGTCATTACCTAAAGTTAAGCTCATTCGAGCTGAAAACAACAGATTCTCTGGACAAATACCTGAATCCATATCGGGAGCTGTTCAGTTGGAGCAAGTTCAGCTTGACAATAACAGCTTTGCCGGTAAAATCCCTCAGGGTCTTGGGCTGGTCAAGAGCTTATACAGATTCTCTGCGTCTCTCAATCGTTTCTACGGAGAACTTCCTTTAAGCTTTTGTGATTCCCCTGTCATGAGCATTGTGAATCTCTCTCACAATTCCCTTTCCGGTCAAATCCCAGAGCTGAAAAAATGCAGGAAACTGGTTTCATTGTCTTTAGCAGACAATAGTCTCACCGGACAAATCCCTCCTTCCCTTGCTGAGTTGCCAGTGCTAACTTATCTTGATCTTTCAGCTAACAATCTCACTGGTTCAATCCCGCTAGGACTTCAAAATTTAAAGCTTGCTCTTTTCAATGTGTCCTTCAATCAGCTATCTGGTAAGGTCCCTTACTCCTTGATTTCTGGTCTCCCTGCCTCATTTTTGGAAGGAAATCCTGAACTTTGTGGCCCTGGATTGCCCACTTCTTGTTCTGACGATCCTCGAAGACACCATTCCGGGGGTCTCACTGCCCTTGCATGTGCCCTTATCTCTGTAGCTTTCGTTGTAGGAACTGCTGTGTTTGTTGGTGGATTTATTTTGTATAGGAAGTCCAGCAAGAGGAATCAAATAGGAGTTTGGCGCTCAGTGTTCTTCTATCCTCTTAGAATTACTGAGCAAGATCTGCTGATAGGAATGGATGAGAAAAGCTTGATTGGAAATGGTGGGGTTTTTGGCAAAGTTTATGTTGTGAGTTTACCCAGCGGTGAACAAGTGGCTGTAAAGAAGCTAGTCAATTTTGGGAACCAGACGTCAAAAAGTTTGAAAGCTGAGGTCAAGACATTGGCTAAGATTAGGCATAAGAATGTTGTAAAAATCCTGGGGTTTTGCCATTCTGATGAGTCAATCTTTCTCATTTATGAGTACCTGCAAGATGGAAGCTTAGGGGACTTGCTTTCCCGTGAGAATTTTGAGCTGCAGTGGGAGGCAAGATTGAGGATTGCCATCAGGGTCGCTCAAGCACTAGCTTATCTTCACAAAGACTACGTTCCTCACTTGCTTCACAGAAACGTCAAGTCCAGGAACATTCTGCTGGATGCAAACTTTGAGCCAAAACTCACAGATTTTGCTCTTGATCGAATTGTGGGAGAAGCCGCATTTCAGTCAACTGTTGCTTCTGAAGCGGCATCTTCCTGCTATAATGCTCCAGAATGTGGGTACAGTAAGAAAGCAACTGAAGAATTGGACATATACAGCTATGGTGTTGTATTGCTAGAGCTTGTGACCGGGAAGCAAGCAGAGCAAACAGTATCAACGGAGTCTCTTGACATAGTGAAGTGGGTACGAAGGAGAGTGAACATCACTGATGGGGTGTATCAAGTACTTGATCCCAAAATATCACCTTCCAATCAGCAAGAAATGATTGGAGTTCTGGAAATCGCTCTTCATTGCACTTCCGTGGTGCCTGAAAAAAGACCATCGATGGTAGAAGTTGTACGAGCTCTTCAGTCCCTTGAGTCACAAACCATCGCTGCGAATTCTCATGATTTGAATGAGGAACCCTCGATCCCAATATGA 2649 0.4326 MAKFCTYLFLILSVTFSTFNLGSSSSSSEADILLSFKASIEDSRKALSSWSNTTSTHYCNWTGIACSSLSVTSINLQKLNLSGELSPSICDLQNLSFLNLADNKFNQSIPLHLSQCSSLETLNLSNNLIWGTIPMQISQFGSLKVLDFSRNYIEGDIPESMGFLKNLQVLNMGSNLLSGDVPAIFMNLTKLAVLDLSENPYLDSEIPESIGELGSLKQLLLHSSGFHGEIPDSFANLRSLTHLDLSQNNLTGEISQGLVSSLKNLVSFDVSQNKLSGSFPNGICNAKGLVNLSPHTNIFSGSIPNTTGECKNLERFQVQNNEFAGDFPYSLWSLPKVKLIRAENNRFSGQIPESISGAVQLEQVQLDNNSFAGKIPQGLGLVKSLYRFSASLNRFYGELPLSFCDSPVMSIVNLSHNSLSGQIPELKKCRKLVSLSLADNSLTGQIPPSLAELPVLTYLDLSANNLTGSIPLGLQNLKLALFNVSFNQLSGKVPYSLISGLPASFLEGNPELCGPGLPTSCSDDPRRHHSGGLTALACALISVAFVVGTAVFVGGFILYRKSSKRNQIGVWRSVFFYPLRITEQDLLIGMDEKSLIGNGGVFGKVYVVSLPSGEQVAVKKLVNFGNQTSKSLKAEVKTLAKIRHKNVVKILGFCHSDESIFLIYEYLQDGSLGDLLSRENFELQWEARLRIAIRVAQALAYLHKDYVPHLLHRNVKSRNILLDANFEPKLTDFALDRIVGEAAFQSTVASEAASSCYNAPECGYSKKATEELDIYSYGVVLLELVTGKQAEQTVSTESLDIVKWVRRRVNITDGVYQVLDPKISPSNQQEMIGVLEIALHCTSVVPEKRPSMVEVVRALQSLESQTIAANSHDLNEEPSIPI 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01975 882 FunFam Leucine-rich repeat family protein 28 182 - -
Accr5g01975 882 Pfam Leucine rich repeat 118 177 IPR001611 GO:0005515
Accr5g01975 882 Pfam Leucine rich repeat 215 275 IPR001611 GO:0005515
Accr5g01975 882 PRINTS Leucine-rich repeat signature 453 466 - -
Accr5g01975 882 PRINTS Leucine-rich repeat signature 240 253 - -
Accr5g01975 882 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
Accr5g01975 882 SUPERFAMILY Protein kinase-like (PK-like) 593 859 IPR011009 -
Accr5g01975 882 Gene3D Transferase(Phosphotransferase) domain 1 667 878 - -
Accr5g01975 882 SMART LRR_typ_2 237 261 IPR003591 -
Accr5g01975 882 SMART LRR_typ_2 188 213 IPR003591 -
Accr5g01975 882 SMART LRR_typ_2 92 116 IPR003591 -
Accr5g01975 882 SMART LRR_typ_2 164 187 IPR003591 -
Accr5g01975 882 SMART LRR_typ_2 453 476 IPR003591 -
Accr5g01975 882 SMART LRR_typ_2 262 286 IPR003591 -
Accr5g01975 882 SUPERFAMILY L domain-like 216 521 - -
Accr5g01975 882 Gene3D Ribonuclease Inhibitor 25 202 IPR032675 -
Accr5g01975 882 SUPERFAMILY L domain-like 25 292 - -
Accr5g01975 882 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 10 861 - -
Accr5g01975 882 ProSiteProfiles Protein kinase domain profile. 591 862 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g01975 882 Pfam Protein tyrosine and serine/threonine kinase 597 859 IPR001245 GO:0004672|GO:0006468
Accr5g01975 882 Gene3D Ribonuclease Inhibitor 203 257 IPR032675 -
Accr5g01975 882 Gene3D Ribonuclease Inhibitor 258 524 IPR032675 -
Accr5g01975 882 FunFam - 585 666 - -
Accr5g01975 882 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 667 867 - -
Accr5g01975 882 Gene3D Phosphorylase Kinase; domain 1 584 666 - -
Accr5g01975 882 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 261 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01975 Accr-Chr5 46068077 46070848 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01975 33 862 Receptor kinase-like Gene Family AT5G06940 64.439 0.0 1053
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr5g01975 PK_Tyr_Ser-Thr 4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01975 - - gmx:100794428 1392.48