Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01965 ATGGGAAGTTGCAGAAACTCTCCCTTGAAGCCATGGAAGAAGGGGCCAGCCAGAGGGAAGGGAGGCCCTCAGAACGCTTCCTGTGAGTATCGAGGTGTTCGACAAAGAACGTGGGGCAAATGGGTTGCCGAGATAAGAGAGCCGAAGAAGAGAACCAGGCTGTGGCTTGGTTCTTTTGCCACTGCTGAAGAAGCTGCCGTGGCTTATGATGAAGCTGCCATGAGACTCTATGGTCCTGATGCCTACTTCAATTTTCCTCACCTTCAACCAATAACCTCCAGTTCTGTTAGCAAGTCTCAGAAGTTCAAATGGTTTCCTTCGAAGAAGTTCCTTTCAATGTTTCCTTCTCATGGACTCCTCAATGTGAATGCCCAGCCTAGTGTTGACTTAATCCATCAGAGGCTGCAACAACTTGAGCAGAAAAGGGTTTTAAGTCAGATCTCTTCCAGTGCATCCAGTAACCCAAGTGCAGATATTCAGATGACAGGAAGCAAGAATGTTGATATTCCTCCAAAGGAACAGAAAGTTGAAGAAATATCAACAAATATCATGATCGAAGATGTTGAGGAAAAACCGCAGATTGATCTCCATGAGTTCCTTCAACAGCTGGGTATACTGAAAGAAGAAAGACAATCACAAAGTTCTAATAATAATAGCTCAGCGAGTTTCACAGAGACTGAAGATCTATCAATTGGTTGCTGTGACGGAGTGTTTTCTAGTGTTAATTGGGAGGCAATGATGGAGATGCATGGAATAGTAGATCCTAAGGGACTCGAAGCAGCCCATTTCCAAGCATATTGTGATATGAATGAAGAGCTTACTTTCTCCACTTCCATTTGGAACTTTTGA 849 0.4405 MGSCRNSPLKPWKKGPARGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRTRLWLGSFATAEEAAVAYDEAAMRLYGPDAYFNFPHLQPITSSSVSKSQKFKWFPSKKFLSMFPSHGLLNVNAQPSVDLIHQRLQQLEQKRVLSQISSSASSNPSADIQMTGSKNVDIPPKEQKVEEISTNIMIEDVEEKPQIDLHEFLQQLGILKEERQSQSSNNNSSASFTETEDLSIGCCDGVFSSVNWEAMMEMHGIVDPKGLEAAHFQAYCDMNEELTFSTSIWNF 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01965 282 PRINTS Ethylene responsive element binding protein signature 52 68 IPR001471 GO:0003700|GO:0006355
Accr5g01965 282 PRINTS Ethylene responsive element binding protein signature 30 41 IPR001471 GO:0003700|GO:0006355
Accr5g01965 282 FunFam Ethylene-responsive transcription factor 2 28 87 - -
Accr5g01965 282 SUPERFAMILY DNA-binding domain 29 87 IPR016177 GO:0003677
Accr5g01965 282 MobiDBLite consensus disorder prediction 1 27 - -
Accr5g01965 282 Gene3D AP2/ERF domain 29 87 IPR036955 GO:0003700|GO:0006355
Accr5g01965 282 CDD AP2 28 88 IPR001471 GO:0003700|GO:0006355
Accr5g01965 282 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 4 228 - -
Accr5g01965 282 ProSiteProfiles AP2/ERF domain profile. 29 86 IPR001471 GO:0003700|GO:0006355
Accr5g01965 282 MobiDBLite consensus disorder prediction 147 163 - -
Accr5g01965 282 Pfam AP2 domain 28 78 IPR001471 GO:0003700|GO:0006355
Accr5g01965 282 SMART rav1_2 29 92 IPR001471 GO:0003700|GO:0006355
Accr5g01965 282 MobiDBLite consensus disorder prediction 147 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01965 Accr-Chr5 45966575 45967423 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01965 5 282 AP2-EREBP Transcription Factor Family AT3G57600 51.590 1.55e-84 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr5g01965 AP2 8.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01965 - - gmx:100801311 348.591
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02581 2 61416115 61416945 Accr5g01965 5 45966575 45967423 CCT
Accr5g01965 5 45966575 45967423 Accr5g01965 5 45966575 45967423 ECH