Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01963 ATGCTTAGGCAGGAGCTTTGTTTCCTTAGACCACCATTCTTGCTGTGCATTTTCGTTGGCTTCTTGCTAAATTCCATTGTGATCGCTAAGATTCCATTGGGTTCCAAGCTTTTTGTGGGTGACAATTACTGTTGGGTCTCCTCCAACGGTGACTTTGCATTTGGATTCTTTAACATTTCAGATCAACCTAACCTATATAGAATTGGCATTCATTACAATTCAAAGTCTATACCAACTAGCCAGCAAACAGTCGTCTGGACTGCAGGAGCTGATATTACAGTTGGGAATGGGTCCTACTTCCATTTCACTCAGCAAGGAGAACTGATCTTGTTTGATTCCTCCCGGGGAATCCCTACATGGTCTAGTAAAACAGGCAATCAGTCTGTTGTTTCAGCTGCTCTTCATGATAATGGCAACCTTGTTCTATTGGAAAAAGAGCAAAACATTGTCTGGCAAAGTTTTGATGATCCTTCCGATACACTTCTTCCTGGACAGAGTTTATATGGGGATCGAACACTTCGAGCTACAAGCAAGAATTCATTGTCCAGCTATTACAGTCTACACTTGAGCGCTTCCGGTCATTTGCAGCTGCACTGGGAAAGTAGTATTGTTTACTGGGTCAGCAATAACCCTTCTGCTTCAAATCTCAGTGCTTTTCTCCCCTTCAATGGAGCCCTGCAACTTCGGGAACCAAATTTGAAGCCTGTTTGGTCAGTATTTGGAGAAGACCACAATGATTCTGTGAATTACAGGTTTCTTAGGCTTGATTCAGATGGCAATCTACGCTTATATTCATGGATAGAAACTACACAACTTTGGAGGCCAGTCTGGCAAGCTGTTGAGAATCAGTGCAAGGTTTTTGCTACTTGTGGCCAACTTGGTATCTGTGTGTTCACTGCCTCTGGCGCCACTGATTGTTGGTGCCCCTTTGAGTTCACTGACGGTAACAATTGTTTGGTCCCATATAAGGAGTGCGAATCCGGCTCCAGCATGCTTACATTTAGGAGCACGTTTCTATATGGAATATATCCCCCTAATGATTCAGTTATCATAAGTAGCCTGCAGCAATGTGAGCAGTTATGTCTGAATGATTCGCAGTGTACATTTGCAACCTACTTTAATAATGGAAGTGGTCAGTGCTCCTTGAAGGAAACTCGGTATGCCACTGGTTATGCAGATCCATCTCTAAGCGCAATATCTTTTGTGAAGAGATGTTCAGATCCATTAGCTGTAAATCCCAATCTGAAGCAGTCGCTTCCATTAAAACAGCCTCCTGGACTTTGTCTTCCTTGCCTAACTGGAGCAGCCACTGGCACATGTTTCATCTTTGCTGTGGTTCAGTTGGGAATTGGTTTCTTCATTTTCAAAAGAAAAGGATCTACTAGTAGGAAAAAAGCCACCTTGGGTCTTGCAAGCTCAAACTTGAAGGGCCTAACTGTTTTATCTTTCGCAGAAATCAAGAGCCTCACAGGGGACTTCAAGAACCAAATCGGTCCAAAGATGTTCAATGGTTTGATGCCAGACAATCACCTGGTTACAATCATAGACCTCAATGCATTCATTGAAGAAAGGAAGTTCCGAGGTGCTGTTATGAAGATGGGGAACATCCATCACAGGAACCTTGTGAAGGTGGAGGGTTATTGCTGTGAGTCTAATCATAGATTTGTGGTGTATGAATATGCTAAAAATGGTTCTTTGGATAGATATATAGATGATTCAACTCTGTGCAAGAAGCTAACCTGGAGAAAAAGAATAGGCATATGCTCAAGCGTGGCAACAGCTATCTGTTATCTGCACACTGGGTGTAGGGAGTTCGTGAGCCATGGAAATTTGAAATGTGAAAATGTTCTGTTGGATGAAAACTTCACTGCAAAGTTGACAGATTTTGGGTTTGCAAGAACAGACGGCGGCCAGGCATCATACTGTGGTTTTTCAGCCGAGAAAGATGTGGAAGATTTTGGGAAGTTAGTATTAACTTTGTTGAGTGGATCCCGGAATCACGAGGAAGTTCGCGATTGGGCTTATAGAGAATGGAAGGAAGGGAGAGCTGAAAATGTGGTTGATAAAAGAATTGAAGGTAGAATGGAAGTAGAGGAACTGGAACGTGCATTAAGAATAGCGTTCTGGTGTATTCAGATGGATGATCGCATGAGGCCTTCTATGGGGGAGGTGCTAAGAGTACTAGACGGTAATTCAAGTGTCGAAGCTCCTCCACACCCATTTGCATTTCAGACGCCATTACGGGAAGATGATGAAGAACAAGAATATAGTTCAGAGTCACAAGTATAA 2289 0.429 MLRQELCFLRPPFLLCIFVGFLLNSIVIAKIPLGSKLFVGDNYCWVSSNGDFAFGFFNISDQPNLYRIGIHYNSKSIPTSQQTVVWTAGADITVGNGSYFHFTQQGELILFDSSRGIPTWSSKTGNQSVVSAALHDNGNLVLLEKEQNIVWQSFDDPSDTLLPGQSLYGDRTLRATSKNSLSSYYSLHLSASGHLQLHWESSIVYWVSNNPSASNLSAFLPFNGALQLREPNLKPVWSVFGEDHNDSVNYRFLRLDSDGNLRLYSWIETTQLWRPVWQAVENQCKVFATCGQLGICVFTASGATDCWCPFEFTDGNNCLVPYKECESGSSMLTFRSTFLYGIYPPNDSVIISSLQQCEQLCLNDSQCTFATYFNNGSGQCSLKETRYATGYADPSLSAISFVKRCSDPLAVNPNLKQSLPLKQPPGLCLPCLTGAATGTCFIFAVVQLGIGFFIFKRKGSTSRKKATLGLASSNLKGLTVLSFAEIKSLTGDFKNQIGPKMFNGLMPDNHLVTIIDLNAFIEERKFRGAVMKMGNIHHRNLVKVEGYCCESNHRFVVYEYAKNGSLDRYIDDSTLCKKLTWRKRIGICSSVATAICYLHTGCREFVSHGNLKCENVLLDENFTAKLTDFGFARTDGGQASYCGFSAEKDVEDFGKLVLTLLSGSRNHEEVRDWAYREWKEGRAENVVDKRIEGRMEVEELERALRIAFWCIQMDDRMRPSMGEVLRVLDGNSSVEAPPHPFAFQTPLREDDEEQEYSSESQV 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01963 762 Gene3D Hepatocyte Growth Factor 343 407 - -
Accr5g01963 762 Pfam S-locus glycoprotein domain 245 309 IPR000858 GO:0048544
Accr5g01963 762 Pfam PAN domain 348 401 IPR003609 -
Accr5g01963 762 Gene3D Phosphorylase Kinase; domain 1 455 560 - -
Accr5g01963 762 SMART blect_4 36 157 IPR001480 -
Accr5g01963 762 PIRSF SRK 637 762 IPR024171 GO:0004674
Accr5g01963 762 PIRSF SRK 2 642 IPR024171 GO:0004674
Accr5g01963 762 Gene3D Transferase(Phosphotransferase) domain 1 561 736 - -
Accr5g01963 762 Pfam Protein tyrosine and serine/threonine kinase 523 635 IPR001245 GO:0004672|GO:0006468
Accr5g01963 762 ProSiteProfiles Bulb-type lectin domain profile. 158 276 IPR001480 -
Accr5g01963 762 SMART ntp_6 326 404 IPR003609 -
Accr5g01963 762 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 209 IPR036426 -
Accr5g01963 762 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 641 736 - -
Accr5g01963 762 SUPERFAMILY Protein kinase-like (PK-like) 524 748 IPR011009 -
Accr5g01963 762 ProSiteProfiles Protein kinase domain profile. 442 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g01963 762 PANTHER OS07G0415500 PROTEIN 14 742 - -
Accr5g01963 762 MobiDBLite consensus disorder prediction 736 762 - -
Accr5g01963 762 Gene3D - 29 155 IPR036426 -
Accr5g01963 762 Gene3D - 157 293 - -
Accr5g01963 762 ProSiteProfiles Bulb-type lectin domain profile. 30 155 IPR001480 -
Accr5g01963 762 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 27 156 - -
Accr5g01963 762 ProSiteProfiles PAN/Apple domain profile. 325 405 IPR003609 -
Accr5g01963 762 CDD B_lectin 46 157 IPR001480 -
Accr5g01963 762 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 561 639 - -
Accr5g01963 762 Pfam D-mannose binding lectin 83 172 IPR001480 -
Accr5g01963 762 SUPERFAMILY alpha-D-mannose-specific plant lectins 175 274 IPR036426 -
Accr5g01963 762 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 456 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01963 Accr-Chr5 45926740 45929028 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01963 420 753 Receptor kinase-like Gene Family AT4G23220 28.866 1.60e-38 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Accr5g01963 PK_Tyr_Ser-Thr 1.1e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01963 - - gmx:100815678 1080.47