Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01946 ATGGAAATTCTGGGCTTGTTGTGTTTTGTCGTTGCTTGGTATGTGTCAAAATCTGGTCTTGAAGTTGAGGGTGCTGAGCTACAGGATCAAACTATATTGCTTGCCCTTAACCAAGAGCTTACAGTACAAAGATGGGACGCCAACAACTCAAGTTACTGCTCGTGGCAAGGCGTTAGCTGCAATGACCGCTCAATGGTAGTGAAGCTCGATCTATCTCATGCAAACCTCCGAGGTAATGTCACTCTGGTGTCCCAGCTCAAAGCACTTAGGCAGCTTGACCTTTCAAATAACAATTTTCATGGCTACATTCCTCCGGCTTTTGGAAATTTGTCTGATCTTGAAGTTCTCGATTTGTCTTCAAATAAGTTCGAAGGTTCAATTCCACCAGAATTGGGCGGCCTTAGGAATCTCATATCGTTAAACCTTTCGAACAACTTGCTTGTGGGGAAAATACCAAGTGAACTTCATGGCCTAGAGAAATTGCAGGAGTTTCAAGTCTCTAGTAATCAACTGAATGGATCTCTACCTACTTGGGTGGGAAACTTAACCAATCTGAGAGTTTTGGCTGCCTATGAGAATCTTTTAGGTGGCACGATTCCGGATAATCTTGGCTTGGCTTCTGAGCTTGAAATTCTTAACCTGCATTCAAACCAGCTTGAAGGCCCCATACCAGCTAGCATTTTTACTTCAGGGAACCTTAAAGTTCTGGTTCTGACCCAGAACAATTTGAGTGGTGATCTTCCTCAAGAACTCGGGAATTGTCAAGGCCTTTCCAATATCCGAATTGGGAACAACCATCTAGTTGGTACTATTCCTAAGACCATAGGAAACATTAGTAGTCTTACCTACTTTGAAGCAGACAATAACAATCTTTCTGGTGAGATAGTGTCTGAGTTTTCTCAGTGTTCTAATCTCACCCTTCTGAACCTAGCTTCGAATGGATTCAGTGGAACGATTCCAACAGAACTTGGACAGCTTATGAACCTGCAGGAATTAATTCTTTCTGGAAATAGCCTGTTTGGAAATATTCCAGAATCAATTTTGAGGTGTAGGAATCTTAACAAGCTTGATATAAGCAATAACAGGTTCAATGGAACACTACCAAATGACATCTGCAAATTGTCTAGGCTGCAGTTCTTGTTATTGGGTCAGAATTCCATAGCAGGGGAGATCCCTCATGAAATTGGAAATTGTGCAAAACTTCTTGAGTTGCAATTGGGCAGTAACTATTTGACAGGAATTATCCCTTCTGAGATTGGTCACATTAGGAACTTGCAGATTGCTTTAAATTTGAGTTTCAACCATCTTCATGGATCACTGCCTCCTGAGTTAGGAAGACTGGACAAACTTGTCGCTCTGGATGTTTCGAACAACAGGCTCTCAGGCCATATCCCAGCCGAGCTGAAGGGTATGTTGAGCTTGATAGAGGTAAACTTTTCAAATAATTTGCTCAACGGTCCAGTACCAACATTTGTGCCATTCCAAAAGAGTCCCAATTCAAGTTTTGTGGGTAATAAAGAGCTCTGTGGAGAGCCATTAAACTCTTCATGTGGAGATCTTTACGATGGCAGCAATAACTACCATCACAGAGTTTCCTACAGAATCATACTTGCAGTAATTGGTTCAGGTTTGGCAGTTTTTATGTCAGTTACTGTGGTGGTCTTGCTGTTTATGATTAGAGAGAGGCAAGAAAAGGCAGCCAAAGATGCTGGGTTGGTTGATGACGAAACTAATAACAAACCAACCATAATAGCAGGGAATGTCTTTGTTGAGAATCTAAAACAAGCAGTAGACCTTGATGCTGTTGTTAAGGCAACCCTCAAAGATTCTAATAAGCTCAGCAGTGGTACTTTCAGTACAGTATACAAGGCGGTCATGCCTTCTGGGATGGTTTTATCTGTCAGGAGACTCAAGTCCATGGATAAGACCATAATCCACCACCAAAACAAGATGATCAGGGAACTTGAGAGGCTGAGCAAACTGTGTCATGACAATCTGGTTCGACCCATAGGATATGTTATTTATGAAGATGTTGCTCTTCTCTTGCATCATTTCTTACCCAATGGAACATTGGCTCAGTTTCTTCATGAATCTAGCAAGCAACCTGAATATCAACCCGACTGGCCTACTAGATTATCCGTTGCCATCGGTGTGGCAGAAGGTCTGGCTTTCCTGCATCATGTGGCAATTATCCACCTTGACATTTCTTCTGGCAATGTTCTTTTGGATGCAAATTTCAAGCCTTTGCTTGGGGAGATTGAGATATCAAAACTTCTCGATCCAACCAGAGGTACTGCAAGTATTAGTGCTGTTGCTGGTTCCTTTGGATACATACCACCAGAATATGCATATACAATGCAAGTTACAGCACCTGGCAATGTCTACAGTTATGGTGTAGTTCTACTTGAGATCCTGACAACACGACCCCCGGTTGATGAGGATTTTGAAGAAGGCATAGATTTGGTGAAGTGGGTTCATAGTGCTCCAGTAAGAGGGGAAACTCCAGAGCAGATACTCGATGCAAGGCTTAGCACTGTATCATTTGGTTGGAGGAAAGAAATGCTTGCCGCTTTGAAGGTTGCATTGCTCTGCACTGATACTACCCCTGCAAAACGACCTAAGATGAAGAAGGTAATGGAAATGCTCCAAGAAATAAGGCAAAACTGA 2667 0.4237 MEILGLLCFVVAWYVSKSGLEVEGAELQDQTILLALNQELTVQRWDANNSSYCSWQGVSCNDRSMVVKLDLSHANLRGNVTLVSQLKALRQLDLSNNNFHGYIPPAFGNLSDLEVLDLSSNKFEGSIPPELGGLRNLISLNLSNNLLVGKIPSELHGLEKLQEFQVSSNQLNGSLPTWVGNLTNLRVLAAYENLLGGTIPDNLGLASELEILNLHSNQLEGPIPASIFTSGNLKVLVLTQNNLSGDLPQELGNCQGLSNIRIGNNHLVGTIPKTIGNISSLTYFEADNNNLSGEIVSEFSQCSNLTLLNLASNGFSGTIPTELGQLMNLQELILSGNSLFGNIPESILRCRNLNKLDISNNRFNGTLPNDICKLSRLQFLLLGQNSIAGEIPHEIGNCAKLLELQLGSNYLTGIIPSEIGHIRNLQIALNLSFNHLHGSLPPELGRLDKLVALDVSNNRLSGHIPAELKGMLSLIEVNFSNNLLNGPVPTFVPFQKSPNSSFVGNKELCGEPLNSSCGDLYDGSNNYHHRVSYRIILAVIGSGLAVFMSVTVVVLLFMIRERQEKAAKDAGLVDDETNNKPTIIAGNVFVENLKQAVDLDAVVKATLKDSNKLSSGTFSTVYKAVMPSGMVLSVRRLKSMDKTIIHHQNKMIRELERLSKLCHDNLVRPIGYVIYEDVALLLHHFLPNGTLAQFLHESSKQPEYQPDWPTRLSVAIGVAEGLAFLHHVAIIHLDISSGNVLLDANFKPLLGEIEISKLLDPTRGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRPPVDEDFEEGIDLVKWVHSAPVRGETPEQILDARLSTVSFGWRKEMLAALKVALLCTDTTPAKRPKMKKVMEMLQEIRQN 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01946 888 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 686 888 - -
Accr5g01946 888 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 226 520 - -
Accr5g01946 888 Gene3D Ribonuclease Inhibitor 27 174 IPR032675 -
Accr5g01946 888 ProSiteProfiles Protein kinase domain profile. 607 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g01946 888 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 130 223 - -
Accr5g01946 888 Pfam Leucine rich repeat 88 147 IPR001611 GO:0005515
Accr5g01946 888 Gene3D Ribonuclease Inhibitor 278 522 IPR032675 -
Accr5g01946 888 Gene3D Ribonuclease Inhibitor 175 274 IPR032675 -
Accr5g01946 888 SUPERFAMILY L domain-like 261 513 - -
Accr5g01946 888 SUPERFAMILY L domain-like 44 295 - -
Accr5g01946 888 ProSitePatterns Tyrosine protein kinases specific active-site signature. 730 742 IPR008266 GO:0004672|GO:0006468
Accr5g01946 888 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 577 685 - -
Accr5g01946 888 SUPERFAMILY Protein kinase-like (PK-like) 607 885 IPR011009 -
Accr5g01946 888 Gene3D Transferase(Phosphotransferase) domain 1 686 888 - -
Accr5g01946 888 SMART LRR_typ_2 447 470 IPR003591 -
Accr5g01946 888 SMART LRR_typ_2 158 182 IPR003591 -
Accr5g01946 888 SMART LRR_typ_2 134 157 IPR003591 -
Accr5g01946 888 SMART LRR_typ_2 207 230 IPR003591 -
Accr5g01946 888 SMART LRR_typ_2 326 350 IPR003591 -
Accr5g01946 888 SMART LRR_typ_2 86 109 IPR003591 -
Accr5g01946 888 SMART LRR_typ_2 374 398 IPR003591 -
Accr5g01946 888 SMART LRR_typ_2 110 133 IPR003591 -
Accr5g01946 888 CDD STKc_IRAK 613 885 - -
Accr5g01946 888 FunFam Leucine-rich repeat receptor-like kinase 30 129 - -
Accr5g01946 888 Pfam Leucine Rich Repeat 328 349 IPR001611 GO:0005515
Accr5g01946 888 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 281 886 - -
Accr5g01946 888 Gene3D Phosphorylase Kinase; domain 1 573 685 - -
Accr5g01946 888 Pfam Leucine rich repeat N-terminal domain 28 61 IPR013210 -
Accr5g01946 888 Pfam Protein tyrosine and serine/threonine kinase 610 881 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01946 Accr-Chr5 45804847 45807736 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01946 9 887 Receptor kinase-like Gene Family AT2G41820 73.583 0.0 1301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr5g01946 PK_Tyr_Ser-Thr 3.9e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01946 - - adu:107492611 1470.29