Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01943 ATGGCTAATCATACTGATTCACTTATTCCATTAGACATTAATGCCAATGAATGTGAAGTTGATGTGAAATATCATCCACCAAAGGAACGTGGCCCTGAAATCCGTAATTCAGATGAATATGATGCTGTTCCCACTCCACATAACGGTATGATATTTGGTTCAGAGGATGAGGTGAGGTCGTATTATTCAAAATATGCCAACCAAGTAGGTTTTGGCGTCATGACAAGAACCTCGAGGAAGGTAGCTGATGGCAAGATTGGATATTTCATACTTGCATGTTCTAGAGAGGGATTTAGAAGAAACAGTAGAAGAAATCCCATCAGAAGTGTTCCATCAAGGAAACAGAAGTGTGAAGCCAGGATCAATGTTTCTTTATGTAAAGATGGATTTTACCGGATTCAAACAGTTACGCTTAATCACAATCATGAACTGAGTCCGGGCCAGATCAAGCTAAATGTTGATATTGACACGCGAGCTAAAAGGAAACTAGACCCAGAAGATCAAACTGAGGAGCAGATGAACAAGAGTTTCCGGTCTTTAGTGGTTGGAAATGGGGTTTATGACAATGTGATGTTGTGTCCAAATGATTGTGGAAACTACATTCGGTCAGGAGGCCGGTTGATTGGTGTGGATGGAGATGGTAATGCTCTTTATAAATATTTCATGCGCATGCAAGAACAAGATTGCAATTTCTTCTATGTCCTAGATTTGGATGATTATCTATGTGTGAGGAATGTTTTCTGGGCTGATGCTAGAAGTAGAGCTGCATACAAGTCATTTGGTGATGTGGTTACATTGGATACAACATATGTCTCTGACCAATACAAATTACCCCTCGTATCTTTTGTTGGAGTGAACCATCATGGCCAATCTATACTTTTTGGTTGTGGGTTGATGTCGTGCAGGGACACAAAGTCGTTTGTTTGGTTGTTACAATCATGGTTACATTGCATGTATGGTGTTTCACCAAAAGGCATCATAACAGATGAATGCAAGGCCTTGCTAAATGCAATTAAAACTGTATTCCCCTTTGCTCGACATCGGTGGTGTTTATGGCATATAATGAAAAAATTTCCTGAAAAGTTAGGTCAACATGCGGACTACAAGCTGTTGAGTTGTCGTTTACAAACTGCTATATACGATGCACTTGCTCCCAATGAATTCGAGATGAATTGGAAAACAACCATGAAGGAATTTGGTCTGGAGGACAATGAATGGCTGAATGAGTTGTGCCTTGAGCGACATCGATGGGTGCCTATCTTTGTAAAGAGTGAGTTTTGGGCTGGAATGTCTACTATTCAACACGGTGAAATCATGCATTCTTTTTTTGATGGATATGTTGGTTGCCAGACTACGTTGAAACAATTTCTTGATGCATATGATAATGCATTGCAAGCCAGGGCAGAGAAAGAGTTTGAAGCTGATTTCCGTTCATTTTGCATTACTCTATGTTGTGCTACCAAGTCTCCGTTTGAGCGGCAGTTTCAGACTGCATACACTCACGCAAAGTTTTTGGAGGTTCAGCGAGAGTTTGTTGGAAAGGCTGATTGTAACATGGTTGTTGTTCATGATGAAGGTTCCGTTTGTCGTTATAATGTTATTGAAGATGTGATGGTTGAAGGTAAACCTAAAGACGTTTCATATGGAGTTATATTTGACAGGGTAAACTGTGATGTGAAGTGCGCTTGCCACATGTTTGAGTTCAAAGGAATAATTTGTAGGCACTCACTTGCTGTACTGTCCCAAGAGCGAGTTAAAGAGATTCCATGCAAGTATGTTTTGGATAGATGGAGATCAAATCTAAAGAGGAGACATGTATATGTGAGGACTAGTTACACTGTCAGACAACTCAAACCTCGAATGGAGAGATTTGATTTATTATGCAAGCAATTTGACTCTGTTGCTGAAATTGCTGCTGAATTTGAGGAAACGAGTGCTTTTGTAAGTAATACCCTTTGTGACTTGAAGGAGAAACTGGAAGCGTGGGCAAGCCATATGAGAAACTCACCTGAGGCGGCAGCACCAATAAGCTGTGCAATTAACGGTGCTTCTTGA 2055 0.4044 MANHTDSLIPLDINANECEVDVKYHPPKERGPEIRNSDEYDAVPTPHNGMIFGSEDEVRSYYSKYANQVGFGVMTRTSRKVADGKIGYFILACSREGFRRNSRRNPIRSVPSRKQKCEARINVSLCKDGFYRIQTVTLNHNHELSPGQIKLNVDIDTRAKRKLDPEDQTEEQMNKSFRSLVVGNGVYDNVMLCPNDCGNYIRSGGRLIGVDGDGNALYKYFMRMQEQDCNFFYVLDLDDYLCVRNVFWADARSRAAYKSFGDVVTLDTTYVSDQYKLPLVSFVGVNHHGQSILFGCGLMSCRDTKSFVWLLQSWLHCMYGVSPKGIITDECKALLNAIKTVFPFARHRWCLWHIMKKFPEKLGQHADYKLLSCRLQTAIYDALAPNEFEMNWKTTMKEFGLEDNEWLNELCLERHRWVPIFVKSEFWAGMSTIQHGEIMHSFFDGYVGCQTTLKQFLDAYDNALQARAEKEFEADFRSFCITLCCATKSPFERQFQTAYTHAKFLEVQREFVGKADCNMVVVHDEGSVCRYNVIEDVMVEGKPKDVSYGVIFDRVNCDVKCACHMFEFKGIICRHSLAVLSQERVKEIPCKYVLDRWRSNLKRRHVYVRTSYTVRQLKPRMERFDLLCKQFDSVAEIAAEFEETSAFVSNTLCDLKEKLEAWASHMRNSPEAAAPISCAINGAS 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01943 684 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 37 661 IPR031052 GO:0006355
Accr5g01943 684 Pfam FAR1 DNA-binding domain 60 145 IPR004330 -
Accr5g01943 684 Pfam MULE transposase domain 263 357 IPR018289 -
Accr5g01943 684 Pfam SWIM zinc finger 558 581 IPR007527 GO:0008270
Accr5g01943 684 ProSiteProfiles Zinc finger SWIM-type profile. 548 584 IPR007527 GO:0008270
Accr5g01943 684 SMART 26again6 559 586 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01943 Accr-Chr5 45781431 45783485 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Accr5g01943 MULE 3e-32 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01943 - K17604 gmx:102660547 775.778