Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01938 ATGGCTTCTTCTTCCTCTGATCCTCCTCCAAAGTCCGAGCTTGGCTCAGCCATGGCAGCCACTTCGGAAGCAGCCACCACCGCCGATCAGGTGTTTCTATACAGGGATTTCAAGAAGCCGAAGAAAGAAAGGGGATGTACGGCCAAAGAGCGAATCAGCAAAATGCCTCCTTGTACTGCCGGTAAACGCAGTTCCATATATCGTGGTGTAACCAGGCATAGATGGACAGGTCGTTATGAAGCACATCTTTGGGATAAGAGCACGTGGAACCAAAATCAGAATAAGAAAGGAAAGCAAGTTTACTTGGGGGCATATGATGATGAAGAGGCTGCAGCTAGAGCTTATGACCTTGCTGCCCTAAAATATTGGGGTCCTGGGACTCTCATTAATTTTCCAGTGTCTGATTATACAAGAGATCTTGAAGAAATGCAGAATTTTTCAAGAGAAGAATACCTAGCATCTTTACGACGGAAGAGCAGTGGATTTTCAAGAGGAATCTCAAAATATCGTGGACTCTCCAGTCGATGGGAACCATCATATGGTCGCATGGCTGGATCTGACTACTTCAATAGCATCCATTATGGTACTGGTGATGATTCAGCTGCAGAAAGTGAATATTTAAGTGGTTTCAGTGTAGACAGAAAGATTGATTTAACAAGTTACATCAAATGGTGGGGATCCAATAAGAGTCGCCAAGCTGATGCCGGAACAAAATCATCAGAAGAAAAAAAGCGCAGCTTTGCTGGAGATCATTGCAGTGAACTCAGAACATTGGAACAGCAAGCACAACCTACTGAACCATATCAGATGCCACGGTTAGGCATATCCCATGATGAAAAAAAGCACAAGAATACTTCAGTTTCTGCCTTAAGTATCTTGTCTCGATCAGCTGCCTACAAGAGCTTGGTAGAGAACGCATCAAAGAGAGAGGAAAATAGCACTGAACCTAATGAAAATGAAAACAAAAATAGCATTGACAAGTTGGACCGTGGCAAGGCAGTCATGAAATCATCAAATCATGATGGCAGCAACGAAAAAACTGAATCCGTAATGGGGATGAGTGGGGCTTTGTCTCTTCAAAAGAATGTTTACAACCCACTGGCTCCATTCTTGTCTGCACCTCTTTTGACTGCTTATAATACTATCGATCCCTTAGTAGATCCTCTTCTCTGGACGTCTCTTGTTCCTATGCTTCCTGCCGGCTTTCCCCGTAATGCTGAGGTTACAAAGACTGAGGCCAGTTCATCTTATACCGTCTTTCAGCCGGAGGAGTGA 1275 0.4408 MASSSSDPPPKSELGSAMAATSEAATTADQVFLYRDFKKPKKERGCTAKERISKMPPCTAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQVYLGAYDDEEAAARAYDLAALKYWGPGTLINFPVSDYTRDLEEMQNFSREEYLASLRRKSSGFSRGISKYRGLSSRWEPSYGRMAGSDYFNSIHYGTGDDSAAESEYLSGFSVDRKIDLTSYIKWWGSNKSRQADAGTKSSEEKKRSFAGDHCSELRTLEQQAQPTEPYQMPRLGISHDEKKHKNTSVSALSILSRSAAYKSLVENASKREENSTEPNENENKNSIDKLDRGKAVMKSSNHDGSNEKTESVMGMSGALSLQKNVYNPLAPFLSAPLLTAYNTIDPLVDPLLWTSLVPMLPAGFPRNAEVTKTEASSSYTVFQPEE 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01938 424 Gene3D AP2/ERF domain 66 134 IPR036955 GO:0003700|GO:0006355
Accr5g01938 424 MobiDBLite consensus disorder prediction 303 349 - -
Accr5g01938 424 FunFam AP2-like ethylene-responsive transcription factor 65 134 - -
Accr5g01938 424 MobiDBLite consensus disorder prediction 304 343 - -
Accr5g01938 424 PRINTS Ethylene responsive element binding protein signature 67 78 IPR001471 GO:0003700|GO:0006355
Accr5g01938 424 PRINTS Ethylene responsive element binding protein signature 114 134 IPR001471 GO:0003700|GO:0006355
Accr5g01938 424 MobiDBLite consensus disorder prediction 235 250 - -
Accr5g01938 424 ProSiteProfiles AP2/ERF domain profile. 66 132 IPR001471 GO:0003700|GO:0006355
Accr5g01938 424 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 30 312 - -
Accr5g01938 424 Pfam AP2 domain 66 124 IPR001471 GO:0003700|GO:0006355
Accr5g01938 424 SMART rav1_2 66 138 IPR001471 GO:0003700|GO:0006355
Accr5g01938 424 SUPERFAMILY DNA-binding domain 65 134 IPR016177 GO:0003677
Accr5g01938 424 MobiDBLite consensus disorder prediction 257 282 - -
Accr5g01938 424 MobiDBLite consensus disorder prediction 1 25 - -
Accr5g01938 424 MobiDBLite consensus disorder prediction 231 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01938 Accr-Chr5 45751772 45755234 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01938 1 408 AP2-EREBP Transcription Factor Family AT2G41710 61.337 3.35e-159 455
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr5g01938 AP2 1.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01938 K09285 - gmx:100814117 653.284