Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01932 ATGGTGAAGAGAGATGAAATAGTAATAATGAAGGAGGAAAGTAGTATTTGTACAAGGAGAGGAGTACTGGTGTGGGAGGAGTTGACGGTGGAGGCTGCTCGTCCGAAGAAGAAGCTGCTGAATAACGCCACTGGTTCCGCCCTCCCCGGCAGGCTCTTGGCCCTCATGGGTCCTTCCGGCTCCGGCAAAACTACCCTCCTCCGCTCTCTCTCTGGAAGGCTTGCTGGGAACGTTGTAGTGACTGGCAACGTTGTAATCGGCGGGAAGAAGAGATGCTTCAAATGCAGAGAAGTGTCTTATGTGGATACAGAAGAACTGTTCTTGGGGACTTTGACGGTAAAAGAAACTCTAGCATACTCTGCAAATCTGAGGCTTCCTTCGAGAATGACCCGAGAGGAGATAAGTAAGGTGGTGGAAGAAACCATAATTCAACTGGGTCTAGAAGAATGTGCGGACAGTAGGCTAGGGAACTGGCATTTACGAGGGATTAGCAGTGGCGAAAAGAAGAGACTCAGTATTGGCCTTGAGATTTTGACACAGCCTCATGTCTTGCTTCTGGACGAACCCACAAGTGGACTTGATAGTGCCTCTGCTTTCTATGTGATTCAAACCCTGTGCAGCATAGCTAATGATGGAAAGGTAGTTGTCTGTTCCATTCACCAGCCGAGCAATGAGATCTTTAACCTTTTCGACGATCTTCTTTTACTATCGAGTGGTGAAACTGTTTATTTTGGAGAAGCAAAGATGGCTTTGAAGTTCTTTGCTGATGCAGGGTTCCCCTGTCCAACTAGAAGGAATCCTTCAGATCATTTCCTTCTCTGTGTTAATTTGGAATTTGACGTCATTAATGCTGCTCCGATGAGATCTGAACTGACGTCATCAAATCCTGTAACAGGCAAGAAAACAGAAGACATTAGAGCGACACTCATTGAGTGTTACAAAAATTCGGAGCAAATGATCAATGCAAGAAGGAGAATTCAATGTTTGAAATCCAATTTTCAGGGAGACCATGTAATCAAGTCCAACGTAAGTGGCAGCACCAGTTGTTGGAAGCAGCTCTACACATTGACCCATCGATCATTCCTAAATATGTCAAGGGACATAGGCTACTATTGGCTGAGGATCTTTTTCTATTCCCTGGCAGCCGCTGGTATTGGTCTCTTCTTTTTTCATCTTGGTACTGACAAGGACTCAATCTTGGCCAGAGGAAAGTGTGTATCATTCATATATGGGTTCATAATTTGTCTATCATTTGGAGGACTGCCACTTTTCATTGAAGAATTGAAGGTGTTCTACGGTGAAAGGTCCAAAGGGCATTATGGAGAAGCTGTTTTTGTACTGTCAAACATCCTATCATCTTTCCCTTTCCTACTTGTTACGTCGTTTTGCGTCGTCGCAATCACATACTCCATGGTGGAACTTCATCTGGTTTTAGCTCAAAGTGTTTTTTTCTTCCTGAACTTATTGGTCTGCCTATCTGTCATTGAGGGCTGCCTCATGGTAGTAGCCTCACTGGTGCCTAATGTCCTGATGGGCATAGGAGCAGCAACTGGAGTGATTCTTTTCATGATGATGTGTTCTCCAATCTTCAGACCACAACCTGACCTTCCTAAGTTCTTTTGGCGCTACCCTATGTCCTACTTGAGCTTTGCTACTTGGGCAGTGCAGGGGCAACTCAAGAATGACATGCTGGGGCTTGAATTTGATCCTGTGATTCCTGTTAACCCCAAAATTAAGGGAGAACAAGTCCTGAAACTGATATTTGGGGTTTCATTAAATCATGACAAGTGGTGGGACATAACAGCATTGGTTGCCCTCTTTATAGCTCACCGACTTATCCTTTTCTTGGTGCTTCGGTATAACAAAAGACAGATATCCCCCTTGCGATGGTTTTATGCCAAGGTAAGACCACGCTATGGTGAAGGATTTTCCCTCAGCAAGAAGCAGCCTCGTATTGCTTTTAAGAAACAGCAAGCTGTTCCATTATCTGCTGAATAG 1998 0.4464 MVKRDEIVIMKEESSICTRRGVLVWEELTVEAARPKKKLLNNATGSALPGRLLALMGPSGSGKTTLLRSLSGRLAGNVVVTGNVVIGGKKRCFKCREVSYVDTEELFLGTLTVKETLAYSANLRLPSRMTREEISKVVEETIIQLGLEECADSRLGNWHLRGISSGEKKRLSIGLEILTQPHVLLLDEPTSGLDSASAFYVIQTLCSIANDGKVVVCSIHQPSNEIFNLFDDLLLLSSGETVYFGEAKMALKFFADAGFPCPTRRNPSDHFLLCVNLEFDVINAAPMRSELTSSNPVTGKKTEDIRATLIECYKNSEQMINARRRIQCLKSNFQGDHVIKSNVSGSTSCWKQLYTLTHRSFLNMSRDIGYYWLRIFFYSLAAAGIGLFFFHLGTDKDSILARGKCVSFIYGFIICLSFGGLPLFIEELKVFYGERSKGHYGEAVFVLSNILSSFPFLLVTSFCVVAITYSMVELHLVLAQSVFFFLNLLVCLSVIEGCLMVVASLVPNVLMGIGAATGVILFMMMCSPIFRPQPDLPKFFWRYPMSYLSFATWAVQGQLKNDMLGLEFDPVIPVNPKIKGEQVLKLIFGVSLNHDKWWDITALVALFIAHRLILFLVLRYNKRQISPLRWFYAKVRPRYGEGFSLSKKQPRIAFKKQQAVPLSAE 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01932 665 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 253 IPR027417 -
Accr5g01932 665 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 23 263 IPR003439 GO:0005524
Accr5g01932 665 Gene3D - 12 257 IPR027417 -
Accr5g01932 665 SMART AAA_5 49 240 IPR003593 GO:0016887
Accr5g01932 665 Pfam ABC transporter 40 191 IPR003439 GO:0005524
Accr5g01932 665 Pfam ABC-2 type transporter 352 561 IPR013525 GO:0016020|GO:0140359
Accr5g01932 665 ProSitePatterns ABC transporters family signature. 163 177 IPR017871 GO:0005524|GO:0016887
Accr5g01932 665 Pfam ABC-2 type transporter 220 273 IPR043926 GO:0140359
Accr5g01932 665 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 16 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01932 Accr-Chr5 45701925 45706838 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01932 33 232 Calmodulin-binding Proteins AT2G36910 26.887 4.35e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01932 - K05681 gmx:100802207 857.44