Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01930 ATGGAGGATTGCTCAAGAACTGGCTTTCACGATTTCAATGTGGCTTCACGTAAAGCTGAAGAAGCGGCTTGGAGACGTTATGAAGCCGCAGAGTGGCTTGAAAGGGAAGTGGGCTCTCTCGGCATATCCAATCAGCCGTCGGAGAGAGAATTCATTTCTTGCTTAAGAAATGGTCTCGTTCTCTGCAACGCCATTAACAAGATTCATGCAGGAGCCGTCCCCAAGGTTGTGGATTGTCAAATGCCCTTGCAAACAGTTTCTAGGGATTTCCAGCCTTTGCCTGCCTACCAGTACTTTGAAAATGTAAGAAACTTTCTGGTTGCAGCAGAAGAATTAAAGCTTCCAGCTTTTGAAGCTTCTGATCTTGAACGGGATGCTGTAGACAAGGGATCAGTATCTAAGGTTGTCGATTGCGTTTTAGCGCTTAAATCATATCAAGAGTGGAAGCGGACAACCTCTGAGAATGGAAGTAACAGGCACTTAAGATCTCCTTTTTTAATGCACTCCGCCAGTAGAATGTATTCAAGATCCTCATCCGCAATCTCTTCAGATGCCTGTAGGCGCTTGGATTTGTCAGCCACATCCGATAAAGAGAGCTCTCTCGAGGGTGATTTTCAGAAACCAGAAGGCAAAATTGTGGAATCAATTATTAAGCTATTGGTTGACTGTATGGGTGACGCCAAAGAAAATATTGATGGCAACCTTGCTGCTTCTCTCCGTAATGCTCAGCAGGATCCAATTAAGCTATTCAGTGAGATAATATCAACTTGTTTTGGGGATCAGCTCCAAACAAAGTTCCCTGATTTAGCATTGCTACTGAGGGGTTGTACAAAAGAAAGGAGCACTTCGTCTAATTCAACATCCAGAGCATCAGATGAATATACACCTCAAAGTTTTAAGGTACAGTGTTGCAGAGGCTGCACTACTAAGTGCACTTGCAGCCAGAAGCATCTCTTTGACCTGCAGGAAAAAGAAATTATGGATCTCAAAGCTCTACTGTTGAGAACTAAGAATGAGTTTGATGAGATGAAGTCCCAGTTTCAAAGAGATCTGAATTACCTTGGAAGCCAAGTACTGGAAATGTCCACTGCTGCATGTGGATATTACAAGGCAGTGAAGGAGAACGGCAAATTATACAATATGGTCCAAGATCTGAGAGGTAATATTCGAGTTTACTGCAGAATTAGGCCATCCTTTAGCGCTGAGTCCAAGAATGTGATAGATTTCATTGGCAAGGATGGTTCTCTAGTCCTATTAGATCCATCAAAATCACAAAAAGATGGGAGGAAGGTTTTTCAGTTTAATCGGGTTTTTGGGCCATCAGCTAGCCAAGGTGAAATATACAAGGACACTCGACCACTAATTAGATCTGTGGTAGATGGATATAACGTCTGTATATTTGCTTATGGACAAACCGGATCTGGGAAGACTTATACCATGAGTGGGCCATCAGGTGGATCTTCTAAAGATATGGGGATTAATTATCTTGCTTTGAATGATCTTTTCCAGATGTCTAACCAACGAAAGGACATCATAGCTTACGACATTTACGTTCAAATGGTTGAGATTTACAATGAGCAAGTACGAGACTTGCTTGCAGAGGAAAAAACAGACAACAAATATCCTTTTCTTGACTGGTTATATCTTGTACCACAAACATGTTGA 1665 0.4204 MEDCSRTGFHDFNVASRKAEEAAWRRYEAAEWLEREVGSLGISNQPSEREFISCLRNGLVLCNAINKIHAGAVPKVVDCQMPLQTVSRDFQPLPAYQYFENVRNFLVAAEELKLPAFEASDLERDAVDKGSVSKVVDCVLALKSYQEWKRTTSENGSNRHLRSPFLMHSASRMYSRSSSAISSDACRRLDLSATSDKESSLEGDFQKPEGKIVESIIKLLVDCMGDAKENIDGNLAASLRNAQQDPIKLFSEIISTCFGDQLQTKFPDLALLLRGCTKERSTSSNSTSRASDEYTPQSFKVQCCRGCTTKCTCSQKHLFDLQEKEIMDLKALLLRTKNEFDEMKSQFQRDLNYLGSQVLEMSTAACGYYKAVKENGKLYNMVQDLRGNIRVYCRIRPSFSAESKNVIDFIGKDGSLVLLDPSKSQKDGRKVFQFNRVFGPSASQGEIYKDTRPLIRSVVDGYNVCIFAYGQTGSGKTYTMSGPSGGSSKDMGINYLALNDLFQMSNQRKDIIAYDIYVQMVEIYNEQVRDLLAEEKTDNKYPFLDWLYLVPQTC 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01930 554 Coils Coil 326 346 - -
Accr5g01930 554 ProSiteProfiles Kinesin motor domain profile. 388 554 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Accr5g01930 554 Gene3D Kinesin motor domain 331 545 IPR036961 -
Accr5g01930 554 Gene3D - 11 163 IPR036872 -
Accr5g01930 554 Pfam Microtubule binding 377 532 IPR031852 GO:0008017
Accr5g01930 554 ProSiteProfiles Calponin homology (CH) domain profile. 23 147 IPR001715 GO:0005515
Accr5g01930 554 CDD CH_AtKIN14-like 25 144 - -
Accr5g01930 554 SMART kinesin_4 386 553 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Accr5g01930 554 Pfam Calponin homology (CH) domain 25 146 IPR001715 GO:0005515
Accr5g01930 554 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein with CH (Calponin Homology) domain 330 541 - -
Accr5g01930 554 SMART ch_5 25 142 IPR001715 GO:0005515
Accr5g01930 554 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 350 540 IPR027417 -
Accr5g01930 554 PANTHER KINESIN-LIKE PROTEIN KLP-3 30 536 IPR027640 GO:0003777|GO:0007018
Accr5g01930 554 FunFam Kinesin-like protein KIN-14L 11 174 - -
Accr5g01930 554 SUPERFAMILY Calponin-homology domain, CH-domain 22 151 IPR036872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01930 Accr-Chr5 45665623 45669950 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01930 334 532 Calmodulin-binding Proteins AT5G65930 37.019 5.14e-28 117