Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01924 ATGGATAGTTTATTGAAGGATTTCGAACTTGAGCACAAGAATCCTTCCACCGAAGCCATGCGGAGGTGGAGATCTGCCGTCCGGTTGGTCAAGAACCCTCGCAGAAGGTTTCGAATGGTCGCCGATCTGGACAAACGTTCCGAAGCCGAGAGGATGAAGCAGAAAATCCGGGAAACGCTTCGGGTTGCCCTTTATGTTCAAAAGGCGGCACTACAGTTTATGGATGCTGGAGCTCGAGTTGAGTACATTCTATCAGAGGAGGCAAGAGAAGCTGGTTTTGGTATTAATCCAGATGACATTGCCTCCATTGTTCGTAGCCATGATTATAAGAAATTGAGAATGATTGGAGGAATTGGAGGGGTTGCATCAAAATTATCTGTCTCTTCCATGGACAAAGGTGTCAGCAAAAACACTATAAACACCAGGCAACAGATTTATGGGTTCAACCGCTATAAAGAGAAACCAACTAGAACCTTCCTCATGTTTGTGTGGGAAGCATTGCATGACTTAACGCTAATCATTCTTATGGTCTGTGCTTTAGCCTCTATAGGTATAGGGATTGCCACTGAAGGGTGGCCAAAGGGTGTGTATGATGGTCTGGGAATCATACTTAGTATATTTTTGGTAGTCATTGTTACTGCTGTAAGTGACTACAACCAATCGCTGCAGTTCAGGGATTTGGACAGGGAAAAGAAAAAGATATTTGTTCAGGTCACCAGGGATGGGAAAAGGGAGAAAATATCAATTTATGATCTGGTTGTGGGAGATATTGTTCATTTGTCAACCGGGGATCAAGTTCCAGCTGATGGGATTTTCATATGGGGATTCAACTTGCTCATCGATGAGTCAAGTTTGTCAGGTGAGAGCGAACCAGTAAATGTAAATGAAGAAAAACCTTTCCTTCTTTCAGGAACAAAAGTGCAAGATGGTCAAGGGAAAATGTTAGTGACAACTGTTGGCATGAGGACTGAATGGGGAAAGCTGATGGAAACCCTAAGCGAGGGTGGAGAGGATGAGACCCCATTGCAAGTGAAATTGAATGGAGTTGCTACGCTTATTGGTAAGATTGGTCTGGCTTTTGCTGTTGTAACATTTCTGGTGTTGATGATAAGGTTTGTGGTGGAAAAAGCACAGCGCGGTGAGATCACTAATTGGTCTTTAAGTGATGCAATGAAGTTGCTGGATTACTTTGCTATTGCTGTTACCATTATAGTTGTTGCAGTTCCTGAAGGATTACCATTGGCTGTAACACTCAGCCTTGCTTTTGCAATGAAAAAATTAATGAATGACAGGGCACTTGTGAGGCATCTTGCAGCATGTGAGACAATGGGTTCATCCACTTGCATTTGCACAGATAAGACAGGGACACTGACTACTAATCACATGGTGGTTGATAAAATATGGACATGCGAAAAATCCGTGGATATAAATGGTGAAGAGAGCAGAGACAAATTGAAAACGGAAGTATCTAAAGAAGTTTTTAGCATCCTTTTCCAAGCTATATTTCAAAATACTTCTGCTGAAGCAGTTAAAGATAAGGATGGAAAGAACACAATATTGGGAACACCAACAGAATCTGCTTTACTGGAATTTGGGTTGTTTTTGGGTGGTGATTTTGATGCTCATCGCAGTGAGTATAAGATAGTTAAGATTGAGCCTTTCAACTCAGTCCGGAAGAAGATGTCTGTCCTTGTGCGTCTTCCTGATGAAGGGTTACGAGCTTTCTGTAAAGGTGCATCAGAAATAATATTAAGAATGTGTGACAAAATTATTGATAGTGATGGAAATACTGTTAATCTTCCTGAAGATCGTGCAAAGAATGTCTCTGATGTGATAAATGGTTTTGCCTCTGAAGCTTTAAGAACTCTTTGTTTGGCTTACAAAGACATAAATGATGCCCAACAAGGGGACATAAATGATGCCCAAAAAGGGGAGACTATTATCCCTGATAATGGCTATACACTAATCGCTGTTGTAGGAATCAAGGATCCTGTGCGCCCTGGGGTTAAAGAAGCTGTTCAAACTTGTATGGCCGCGGGAATAACAGTTCGTATGGTCACTGGAGACAATATAAACACAGCTAGGGCTATAGCTAAAGAATGTGGTATACTTACTGAAGGTGGTGTTGCCATTGAAGGACCAGAATTTCGAAACCTGTCTCCTGATCAAATGAAGGAGATCATACCAAAAATTCAGGTAATGGCACGATCCTTACCGCTTGACAAACATACCTTAGTTTCAAATTTGCGGAACATGTTTGGTGAGGTTGTTGCTGTTACAGGCGATGGAACAAACGATGCTCCTGCACTGCATGAGTCTGACATTGGACTTGCCATGGGAGTAGCTGGGACCGAGGTTGCTAAAGAAAATGCTGATGTCATTATATTGGATGATAACTTCTCAACTATTGTCAATGCGATCAGATGGGGGCGAGCTGTATACATAAATATTCAGAAATTTGTGCAATTTCAGTTAACAGTCAATGTGGTGGCTCTGGTGATCAACTTCGTTTCTGCATGCTTCACAGGATCTGCTCCTTTAACAGCTGTACAATTACTTTGGGTGAACTTGATTATGGACACTCTGGGTGCATTGGCCCTGGCCACAGAACCTCCTACTGATGAGCTCATGAAAAGGCCTCCTGTTGGTAGAGAAGCAGGCTTTATCACCAAACCCATGTGGAGAAATATCATCGGTCAAAGTATATATCAACTAGTTGTCCTAGCAGTTCTCTATTTTGATGGGAAGACCATCCTGAAACTCAACGGTCCAGATGCTGCCAGTGTCCTAAACACGTTGATATTCAACTCCTTTGTCTTCTGCCAGGTTTTCAATGAGATCAACAGCCGAGCCATAGAGGACATAAATATATGCAGAGGCATGTTTGAGAGTTGGATATTTTTAGCTGTAGTGTTTTCCTCGGTGGCATTTCAAGCGGTGATTGTTGAGTTCTTGGGAGCATTTGCTAGCACTGTGCCTTTGAACTGGCAACTATGGGTGCTGAGTGTGTTAATTGGAGTAGTTAGCTTGCCCGTAGGGGCCATCCTCAAGTGCATCCCTGTAGAAAGAGCTGCTCCAAAACACCATCACGACGGCTATGACGCTTTGCCTTCTGGTCCTGACATGGCTTAA 3132 0.4272 MDSLLKDFELEHKNPSTEAMRRWRSAVRLVKNPRRRFRMVADLDKRSEAERMKQKIRETLRVALYVQKAALQFMDAGARVEYILSEEAREAGFGINPDDIASIVRSHDYKKLRMIGGIGGVASKLSVSSMDKGVSKNTINTRQQIYGFNRYKEKPTRTFLMFVWEALHDLTLIILMVCALASIGIGIATEGWPKGVYDGLGIILSIFLVVIVTAVSDYNQSLQFRDLDREKKKIFVQVTRDGKREKISIYDLVVGDIVHLSTGDQVPADGIFIWGFNLLIDESSLSGESEPVNVNEEKPFLLSGTKVQDGQGKMLVTTVGMRTEWGKLMETLSEGGEDETPLQVKLNGVATLIGKIGLAFAVVTFLVLMIRFVVEKAQRGEITNWSLSDAMKLLDYFAIAVTIIVVAVPEGLPLAVTLSLAFAMKKLMNDRALVRHLAACETMGSSTCICTDKTGTLTTNHMVVDKIWTCEKSVDINGEESRDKLKTEVSKEVFSILFQAIFQNTSAEAVKDKDGKNTILGTPTESALLEFGLFLGGDFDAHRSEYKIVKIEPFNSVRKKMSVLVRLPDEGLRAFCKGASEIILRMCDKIIDSDGNTVNLPEDRAKNVSDVINGFASEALRTLCLAYKDINDAQQGDINDAQKGETIIPDNGYTLIAVVGIKDPVRPGVKEAVQTCMAAGITVRMVTGDNINTARAIAKECGILTEGGVAIEGPEFRNLSPDQMKEIIPKIQVMARSLPLDKHTLVSNLRNMFGEVVAVTGDGTNDAPALHESDIGLAMGVAGTEVAKENADVIILDDNFSTIVNAIRWGRAVYINIQKFVQFQLTVNVVALVINFVSACFTGSAPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRPPVGREAGFITKPMWRNIIGQSIYQLVVLAVLYFDGKTILKLNGPDAASVLNTLIFNSFVFCQVFNEINSRAIEDINICRGMFESWIFLAVVFSSVAFQAVIVEFLGAFASTVPLNWQLWVLSVLIGVVSLPVGAILKCIPVERAAPKHHHDGYDALPSGPDMA 1043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01924 1043 Pfam Cation transporter/ATPase, N-terminus 119 182 IPR004014 -
Accr5g01924 1043 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 48 IPR024750 GO:0005516
Accr5g01924 1043 Pfam E1-E2 ATPase 235 428 - -
Accr5g01924 1043 SMART Cation_ATPase_N_a_2 121 187 IPR004014 -
Accr5g01924 1043 ProSitePatterns E1-E2 ATPases phosphorylation site. 452 458 IPR018303 -
Accr5g01924 1043 CDD P-type_ATPase_Ca_PMCA-like 139 893 - -
Accr5g01924 1043 PRINTS H+-transporting ATPase (proton pump) signature 792 817 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Accr5g01924 1043 PRINTS H+-transporting ATPase (proton pump) signature 608 626 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Accr5g01924 1043 PRINTS H+-transporting ATPase (proton pump) signature 760 776 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Accr5g01924 1043 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 459 664 IPR023299 GO:0000166
Accr5g01924 1043 FunFam Calcium-transporting ATPase 212 333 - -
Accr5g01924 1043 Pfam Cation transport ATPase (P-type) 509 590 - -
Accr5g01924 1043 Gene3D - 460 664 IPR023299 GO:0000166
Accr5g01924 1043 FunFam Calcium-transporting ATPase 15 75 - -
Accr5g01924 1043 Gene3D - 15 76 - -
Accr5g01924 1043 PRINTS P-type cation-transporting ATPase superfamily signature 281 295 - -
Accr5g01924 1043 PRINTS P-type cation-transporting ATPase superfamily signature 450 464 - -
Accr5g01924 1043 PRINTS P-type cation-transporting ATPase superfamily signature 679 689 - -
Accr5g01924 1043 PRINTS P-type cation-transporting ATPase superfamily signature 760 779 - -
Accr5g01924 1043 PRINTS P-type cation-transporting ATPase superfamily signature 657 668 - -
Accr5g01924 1043 PRINTS P-type cation-transporting ATPase superfamily signature 784 796 - -
Accr5g01924 1043 Gene3D - 132 333 - -
Accr5g01924 1043 FunFam Calcium-transporting ATPase 655 805 - -
Accr5g01924 1043 SUPERFAMILY Calcium ATPase, transmembrane domain M 117 1021 IPR023298 -
Accr5g01924 1043 FunFam Calcium-transporting ATPase 460 664 - -
Accr5g01924 1043 SFLD Haloacid Dehalogenase 432 812 - -
Accr5g01924 1043 Gene3D - 165 1019 - -
Accr5g01924 1043 Gene3D - 447 805 IPR023214 -
Accr5g01924 1043 Pfam Cation transporting ATPase, C-terminus 845 1018 IPR006068 -
Accr5g01924 1043 NCBIfam calcium-translocating P-type ATPase, PMCA-type 105 1022 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Accr5g01924 1043 NCBIfam HAD-IC family P-type ATPase 725 848 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Accr5g01924 1043 NCBIfam HAD-IC family P-type ATPase 388 473 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Accr5g01924 1043 FunFam Calcium-transporting ATPase 777 1023 - -
Accr5g01924 1043 SUPERFAMILY Calcium ATPase, transduction domain A 235 331 IPR008250 -
Accr5g01924 1043 PANTHER CATION TRANSPORTING ATPASE 76 1021 - -
Accr5g01924 1043 SFLD p-type atpase 432 812 IPR044492 -
Accr5g01924 1043 SUPERFAMILY HAD-like 449 865 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01924 Accr-Chr5 45610821 45617012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01924 58 1040 Primary Pumps ATPases AT3G57330 72.838 0.0 1481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01924 K01537 - gmx:100783489 1625.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02630 2 62033261 62042830 Accr5g01924 5 45610821 45617012 CCT
Accr5g01924 5 45610821 45617012 Accr5g01924 5 45610821 45617012 ECH