Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01891 ATGTCCCTTGAGGATTCTCTAAGATCTCTTTCCCTCGACTACCTCAACCTCCTCATCAACGGCCAGGCCTTCAGTGACGTCACCTTCAGCGTCGAGGGTCGTCTCGTCCACGCTCATCGCTGCATCCTCGCTGCTCGGAGCCTCTTCTTCAGGAAATTCTTCTGCGCACCGGAGCCTCCGCCGGGGCTGGAACCGGTGGGTTCTCGGGTCAACTCGGCTGGCTCGGGCCAAAGGCCAGGGATCATTCCTGTGAACTCTGTCGGTTATGAAGTGTTCCTGTTGCTTCTTCAGTTCCTGTACAGCGGCCAGGTCTCTATTGTGCCTCAGAAGCACGAGCCGCGGCCCAATTGTGGGGAGCGAGGATGTTGGCACACGCATTGCACCTCCGCCGTTGATCTTGCCCTTGATACTCTCGCCGCCGCTAGATCTTTCGGTGTTGAACAGCTTGCATTGCTCACCCAGAAACAGTTGGCGAGTATGGTAGAGAAGGCGTCGATTGAAGATGTAATGAAAGTGCTGGTAGCATCAAGAAAGCAAGACATGCACCAGCTGTGGGCCACTTGCTCCCACCTGGTTGCCAAGTCAGGTCTCCCACCCGAAGTCCTCGCCAAACACCTCCCCATCGACGTCGTTGCCAAGATTGAAGAGATTCGTCTCAAGTCATCCTTCACCCGCCGCTCTCTATTGCCCTACCAACACCCCGACCTCCGCGTCGCCGACCTCGAGGACCAGAAAATCCGGCGAATGAAACGAGCACTCGACGCCTCCGATGTGGAGCTCGTTAAGCTCATGGTAATGGGGGAAGGCCTAAATCTTGATGAAGCATTGGCCTTGCATTATGCTGTAGAGAATTGCAGCCGAGAAGTGGTGAAGGCATTGTTGGAGCTCGGGGCTGCCGATGTGAACTACCCAGCCGGGCCTGCCGGGAAAACTCCACTCCACATTGCATCGGAGATGATATCGCCGGACATGGTGGCAGTGCTGTTGGACCACCATGCTGATCCGAACGTGCGGACAGTGGATGGTGTGACCCCACTGGACATCCTGAGAACCCTAACTTCAGATTTTCTGTTCAAAGGGGCCGTACCTGGGCTAACCCACATAGAACCCAACAAGCTGAGGCTGTGCTTGGAACTGGTTCAATCGGCGGCTCTTGTGATTTCTCGAGAAGAAGGAAATGCTAATAATCCTCCCACATCAACGGCCATATATCCGCCACTGAGTGAGGATCATAGCAGCGGCAGCAGCAGCAACCTGAACCTGGACTCTAGGTTGGTTTATCTGAATCTGGGCGCCGCGGCGTCAGGTCAAATAGTTTCCAGATTGGACGGAGATGACGATTGCCACAGGGATCCCATGAACCGTCATGGTTCACAAGGAGGTGGTGGATGTGACCCAACAATGTACCACCACCACCACCCTCATGATTTCTAG 1434 0.5502 MSLEDSLRSLSLDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCAPEPPPGLEPVGSRVNSAGSGQRPGIIPVNSVGYEVFLLLLQFLYSGQVSIVPQKHEPRPNCGERGCWHTHCTSAVDLALDTLAAARSFGVEQLALLTQKQLASMVEKASIEDVMKVLVASRKQDMHQLWATCSHLVAKSGLPPEVLAKHLPIDVVAKIEEIRLKSSFTRRSLLPYQHPDLRVADLEDQKIRRMKRALDASDVELVKLMVMGEGLNLDEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHIASEMISPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVISREEGNANNPPTSTAIYPPLSEDHSSGSSSNLNLDSRLVYLNLGAAASGQIVSRLDGDDDCHRDPMNRHGSQGGGGCDPTMYHHHHPHDF 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01891 477 ProSiteProfiles BTB domain profile. 25 108 IPR000210 GO:0005515
Accr5g01891 477 ProSiteProfiles Ankyrin repeat region circular profile. 308 338 - -
Accr5g01891 477 FunFam regulatory protein NPR5 isoform X2 239 356 - -
Accr5g01891 477 ProSiteProfiles Ankyrin repeat profile. 308 340 IPR002110 GO:0005515
Accr5g01891 477 CDD BTB_POZ_NPR_plant 8 161 - -
Accr5g01891 477 Pfam Ankyrin repeats (3 copies) 257 338 IPR002110 GO:0005515
Accr5g01891 477 SUPERFAMILY Ankyrin repeat 267 351 IPR036770 -
Accr5g01891 477 MobiDBLite consensus disorder prediction 445 467 - -
Accr5g01891 477 Pfam BTB/POZ domain 16 109 IPR000210 GO:0005515
Accr5g01891 477 Pfam Domain of unknown function (DUF3420) 196 249 IPR024228 -
Accr5g01891 477 SUPERFAMILY POZ domain 8 159 IPR011333 -
Accr5g01891 477 PANTHER BTB/POZ DOMAIN AND ANKYRIN REPEAT-CONTAINING PROTEIN NH5.2 1 472 IPR044284 GO:0099402
Accr5g01891 477 MobiDBLite consensus disorder prediction 391 416 - -
Accr5g01891 477 Gene3D - 241 356 IPR036770 -
Accr5g01891 477 SMART ANK_2a 273 303 IPR002110 GO:0005515
Accr5g01891 477 SMART ANK_2a 308 337 IPR002110 GO:0005515
Accr5g01891 477 SMART BTB_4 25 161 IPR000210 GO:0005515
Accr5g01891 477 FunFam regulatory protein NPR5 isoform X1 4 194 - -
Accr5g01891 477 Gene3D Potassium Channel Kv1.1; Chain A 4 194 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01891 Accr-Chr5 45227397 45229825 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Accr5g01891 BTB 7e-14 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01891 K14508 - qsu:112012060 777.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02682 2 62619113 62621765 Accr5g01891 5 45227397 45229825 CCT
Accr5g01891 5 45227397 45229825 Accr5g01891 5 45227397 45229825 ECH