Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01879 ATGGGAATGGCCGCGGACTCCCGATTTCATGTATTGGCCGTAGATGACAGCCTTATAGACAGGAAGCTGATTGAGAAGCTGCTCAAGACCTCTTCCTATCAAGTTACTACGGTGGATTCTGGTAGCAAGGCTCTGGAGTTCCTGGGCTTGCGCAACAATGACCAGATCGACCCCAGCGCGCCATCGGTTTCTCCCGGTAATCTTCAGGAAGTGGAGGTGAACCTTATTATTACGGACTACTGTATGCCTGGCATGACAGGCTATGATTTACTCAAGAAAATCAAGGAATCTTCGTCTTTAAAAAACATACCAGTGGTGATAATGTCGTCGGAGAATGTGCCTTCAAGAATTAGCAGATGCTTGGAGGAAGGAGCAGAGGAGTTTTTCCTTAAGCCAGTGAGGCTATCAGATTTGAATAAGCTTCGACCCCATTTAATGAAGACAAAGTTGAAGGAACAAAAGCCTGAAACAACGCAAGAAATTCCTGAAAACCCCCGAGTTCAACAAGAAGAAAATCAAATTGATGTGCAACAACCAACATCACAGTCACAACAAGATCAAAAACAACAACAGCCACAGCTAGAACAACAACAACCACAATCACCACAAGCAGCCAGTAATAACAAGAGAAAGGCCATAGAACAACAGGGGCTTCCACCTGAGACTGAAAGAACGAGACCTCGATACAGTGACATAGCCACAGTGGTGTGA 711 0.4529 MGMAADSRFHVLAVDDSLIDRKLIEKLLKTSSYQVTTVDSGSKALEFLGLRNNDQIDPSAPSVSPGNLQEVEVNLIITDYCMPGMTGYDLLKKIKESSSLKNIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLRPHLMKTKLKEQKPETTQEIPENPRVQQEENQIDVQQPTSQSQQDQKQQQPQLEQQQPQSPQAASNNKRKAIEQQGLPPETERTRPRYSDIATVV 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01879 236 CDD REC_typeA_ARR 11 141 - -
Accr5g01879 236 Pfam Response regulator receiver domain 11 140 IPR001789 GO:0000160
Accr5g01879 236 MobiDBLite consensus disorder prediction 160 213 - -
Accr5g01879 236 ProSiteProfiles Response regulatory domain profile. 10 146 IPR001789 GO:0000160
Accr5g01879 236 SUPERFAMILY CheY-like 8 154 IPR011006 -
Accr5g01879 236 Gene3D - 10 227 - -
Accr5g01879 236 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 201 IPR045279 GO:0009736
Accr5g01879 236 MobiDBLite consensus disorder prediction 147 236 - -
Accr5g01879 236 SMART REC_2 9 142 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01879 Accr-Chr5 45137927 45139446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01879 1 236 Response Regulator Gene Family AT3G57040 60.484 4.51e-95 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Accr5g01879 Response_reg 7e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01879 K14492 - gmx:100814494 295.819