Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01861 ATGGGACTGTGTCATGGAAAACCTAAGGAAATCCCGCAAACGCAAGGGGGAGAAAATCCAATATTCTGCGACGACAAAGAGGGACTTCCAAATTCTCAAGGAAGGAAATCCACAAACTTTCCCTTTTATAGCCCAAGTCCCTTACCGAGCCTCTTCAAGAACTCACCTGCAATCTCAATCTCGAGCGTGAGCTCAACTCCTTTGGGCATCTTCAAGCGCCCGTTTCCTCCTCCTTCGCCGGCCAAGCACATTCGGTCGTTGCTTGCTCGAAGGCATGGTTCTGTGAAGCCAAACGAGGCCTCCATCCCCGAAGGAAGCGAGTGCCACGTCGGACTCGATAAGAGTTTCGGGTTTTCGAAGCAGCTCCTAGTTCATTACGAGCTTGGAGAAGAAATGGGACGTGGCCATTTTGGATATACTTGCTCCGCCAAGGGAAAAAAGGGCAGCTTGAAGGGGCAGGATGTGGCAGTCAAAGTCATCCCAAAATCCAAGATGACAACAGCTATTGCTATAGAGGATGTAAGGAGAGAAGTGAAGATGTTGCGGGCTCTAACGGGACATAAGAACCTGGTGCAATTCTACGAGGCCTATGAAGATGATGACAATGTTTATGTAGTTATGGAGTTATGCAAAGGAGGTGAACTCCTAGACAGAATACTTTCCAGGGGTGGAAAGTATTCAGAAGAGGACGCCAAGGTTGTTATGATTCAGATATTAAGCGTGGTGGCTTTCTGTCATCTTCAGGGTGTGGTTCATCGAGATCTAAAGCCAGAGAATTTTCTTTTTACATCAAAGGATGAATCCTCTACACTAAAGGCTATTGATTTTGGTCTCTCTGACTATGTAAAGCCAGATGAAAGGTTGAATGATATTGTGGGGAGTGCATATTATGTGGCTCCTGAAGTTTTGCATAGATCTTATGGGACTGAAGCAGACATGTGGAGCATTGGTGTAATTTCTTACATTCTATTATGTGGAAGCCGTCCTTTCTGGGCCCGGACAGAATCTGGCATTTTTCGTACTGTCCTGAAGGCAGATCCAAGTTTTGATGAAGCTCCTTGGCCTTCTTTATCAGTTGATGCAATCGATTTTGTAAAGAGACTGTTGAATAAGGATTATCGTAAGAGATTAACTGCAGCTCAGGCTCTTTGTCATCCATGGCTGGCAAATCATGATGATGATATGAAGATACCTCTGGATATGATAATCCCCAAGTTTGTTAAGGCTTACACATGCTCATCTTCTTTACGCAAATCAGCTCTAGGGGCTCTTGCCAAGACATTAACAGTTGCTCAGCTAGCTTATTTCAGAGAACAGTTTACTCAGTTAGGGCCGAATAAAAATGGATTTATCTCATTGCAGAACTTTAAGACGGCTTTTTTGAGGAGCTCCACTGATGCCTCAAAGGATTCACGGGTCTTGGATTATGTCAACATGATTAGTTCTATCCAATACAGGAAATTGGACTTTGAGGAATTTTGCGCTGCTGCTATAAATGTGCACCAACTAGAGGCTATGGAGACCTGGGAGCAACATGCTAGGCGAGCCTATGAGCTATTTGATAAGCGTGGAAATAGACCAATTATGATTGAAGAACTAGCCTCGGAGCTTGGGCTCAGCCCATCAGTGCCTGTTCATGTGGTTCTGCAAGATTGGATAAGACACGCAGATGGGAAACTTAGTTTCTTGGGGTTTGTCAGGCTTCTGCATGGGGTTTCTTCCCGCACATTTCAGAAGGCTTGA 1743 0.4492 MGLCHGKPKEIPQTQGGENPIFCDDKEGLPNSQGRKSTNFPFYSPSPLPSLFKNSPAISISSVSSTPLGIFKRPFPPPSPAKHIRSLLARRHGSVKPNEASIPEGSECHVGLDKSFGFSKQLLVHYELGEEMGRGHFGYTCSAKGKKGSLKGQDVAVKVIPKSKMTTAIAIEDVRREVKMLRALTGHKNLVQFYEAYEDDDNVYVVMELCKGGELLDRILSRGGKYSEEDAKVVMIQILSVVAFCHLQGVVHRDLKPENFLFTSKDESSTLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWSIGVISYILLCGSRPFWARTESGIFRTVLKADPSFDEAPWPSLSVDAIDFVKRLLNKDYRKRLTAAQALCHPWLANHDDDMKIPLDMIIPKFVKAYTCSSSLRKSALGALAKTLTVAQLAYFREQFTQLGPNKNGFISLQNFKTAFLRSSTDASKDSRVLDYVNMISSIQYRKLDFEEFCAAAINVHQLEAMETWEQHARRAYELFDKRGNRPIMIEELASELGLSPSVPVHVVLQDWIRHADGKLSFLGFVRLLHGVSSRTFQKA 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01861 580 ProSiteProfiles Protein kinase domain profile. 126 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g01861 580 ProSiteProfiles EF-hand calcium-binding domain profile. 431 466 IPR002048 GO:0005509
Accr5g01861 580 FunFam CDPK-related kinase 1 400 572 - -
Accr5g01861 580 FunFam CDPK-related kinase 1 119 214 - -
Accr5g01861 580 FunFam CDPK-related kinase 3 118 290 - -
Accr5g01861 580 SUPERFAMILY EF-hand 418 571 IPR011992 -
Accr5g01861 580 SUPERFAMILY Protein kinase-like (PK-like) 125 420 IPR011009 -
Accr5g01861 580 MobiDBLite consensus disorder prediction 1 39 - -
Accr5g01861 580 Pfam Protein kinase domain 126 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g01861 580 CDD STKc_CAMK 125 387 - -
Accr5g01861 580 FunFam Calcium-dependent protein kinase SK5 298 393 - -
Accr5g01861 580 PANTHER SERINE/THREONINE-PROTEIN KINASE 113 556 - -
Accr5g01861 580 Gene3D Transferase(Phosphotransferase) domain 1 216 410 - -
Accr5g01861 580 ProSitePatterns Serine/Threonine protein kinases active-site signature. 250 262 IPR008271 GO:0004672|GO:0006468
Accr5g01861 580 Gene3D Phosphorylase Kinase; domain 1 119 215 - -
Accr5g01861 580 Gene3D - 411 571 - -
Accr5g01861 580 SMART serkin_6 126 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01861 Accr-Chr5 44900237 44904134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01861 1 578 EF-hand Containing Proteins AT3G50530 66.719 0.0 836
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Accr5g01861 Pkinase 3.9e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01861 K13412 - qsa:O6P43_010056 1001.5