Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01856 ATGGCATCAAGCTCAATGTCATCTTCAGGGTCATGGTCTGCTAAGGACAACAAGGCCTTCGAGAGGGCTCTGGCAATTTATGACAAGGACACTCCTGACCGTTGGCACAATGTTGCAAAGGCTGTTGGTGGCAAAACTGCTGAGGAAGTGAAGAGACACTACGATCTCCTTGTGGAGGACTTGAAGCACATTGAGTCAGGACGAGTGCCCTTTCCTAATTACAGGAAAACTGAAGACTCTGACCAGGGAAAAAGGCTGAAGAACTTGAAGCTCCAGTGA 279 0.4839 MASSSMSSSGSWSAKDNKAFERALAIYDKDTPDRWHNVAKAVGGKTAEEVKRHYDLLVEDLKHIESGRVPFPNYRKTEDSDQGKRLKNLKLQ 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01856 92 FunFam Transcription factor SRM1 4 71 - -
Accr5g01856 92 Pfam Myb-like DNA-binding domain 10 54 IPR001005 -
Accr5g01856 92 ProSiteProfiles Myb-like domain profile. 4 58 IPR001005 -
Accr5g01856 92 Gene3D - 2 71 - -
Accr5g01856 92 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 83 IPR044636 GO:0003700
Accr5g01856 92 MobiDBLite consensus disorder prediction 69 92 - -
Accr5g01856 92 ProSiteProfiles SANT domain profile. 7 54 IPR017884 -
Accr5g01856 92 SUPERFAMILY Homeodomain-like 11 65 IPR009057 -
Accr5g01856 92 CDD SANT 18 54 IPR001005 -
Accr5g01856 92 MobiDBLite consensus disorder prediction 72 92 - -
Accr5g01856 92 SMART sant 8 60 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01856 Accr-Chr5 44872230 44872626 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Accr5g01856 Myb_DNA-binding 1.8e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01856 - - csav:115700854 147.517