Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01848 ATGAGGGAGGACGACACGAATTGGTTCTCGAGATGGGAAGAGGGACTTCCTTCCCCAGAAGAACTCACGCCTCTCTCCCAAACCCTAATCACGCCTGATCTTGCCATGGCTTTCGATATCCGAAACCCACATAGCAATAGCCCTCACCATCAAATCCCTCAACCTCCACCTCCTTCCAATCCCTTACCTTCTCCCGGAAACCCCTCACAACCCAACTCTGCTGAATTTGCCGATTCCGGCGAGCTGGGTTCTGGAACCGCCGGTGAAGAGCCGGCTCGTACCCTCAAGCGCCCTCGCCTTGTCTGGACCCCACAACTTCACAAAAGGTTCGTGGACGCCGTCGGTCACTTGGGTATCAAAAATGCTGTGCCGAAAACCATAATGCAGCTGATGAGTGTGGACGGGTTGACCCGTGAAAACGTGGCCAGTCATTTGCAAAAATATCGACTTTATTTGAAGCGCATGCAGGGACTATCCGCCGGTGGTGGCGCCGGCAGCGGTGGCGGCGCAGGCGGAGCTGGGTTGGGTGCCTCCTCCGATCCTGCCACCGATCATCTATTTGCAAGCTCCCCTGTGCCGCCCCATTTCTTACATTCCGCAGCTAGGACCAATTCCGACCATTTCATGCCGTTCGTGCCCGTTCCGGCGGCTCTGCAGCATCACCATCACCACCAGCAGCAAATGGCAGCGGCTGTGGCCGCCGCCGCCCATCCACAATTGCAGCAGCAGTATCACAGGCAAGTGGGCCATTTTGGGTCGCCGCCGAATGGGAGCTTCGAGCATCCGTTTCTGACAAGGCAGCCTCAACCACTTCATAGGATGGGTCAAGCAATGCAGCACAATCCAGTACCTGGATATGTAGAGGACATGGAATCGGCTAACGCAGCTGGAGGGAGAAAGGTTCTTACTTTATTTCCAACCGGAGATGATTGA 933 0.5573 MREDDTNWFSRWEEGLPSPEELTPLSQTLITPDLAMAFDIRNPHSNSPHHQIPQPPPPSNPLPSPGNPSQPNSAEFADSGELGSGTAGEEPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSAGGGAGSGGGAGGAGLGASSDPATDHLFASSPVPPHFLHSAARTNSDHFMPFVPVPAALQHHHHHQQQMAAAVAAAAHPQLQQQYHRQVGHFGSPPNGSFEHPFLTRQPQPLHRMGQAMQHNPVPGYVEDMESANAAGGRKVLTLFPTGDD 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01848 310 FunFam Two-component response regulator 93 156 - -
Accr5g01848 310 MobiDBLite consensus disorder prediction 49 68 - -
Accr5g01848 310 NCBIfam myb-like DNA-binding domain, SHAQKYF class 98 150 IPR006447 GO:0003677
Accr5g01848 310 Gene3D - 94 156 - -
Accr5g01848 310 MobiDBLite consensus disorder prediction 1 23 - -
Accr5g01848 310 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 102 153 IPR017930 -
Accr5g01848 310 MobiDBLite consensus disorder prediction 37 96 - -
Accr5g01848 310 Pfam Myb-like DNA-binding domain 101 149 IPR001005 -
Accr5g01848 310 SUPERFAMILY Homeodomain-like 94 154 IPR009057 -
Accr5g01848 310 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 2 280 IPR044841 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01848 Accr-Chr5 44782114 44783046 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01848 1 310 G2-like Transcription Factor Family AT3G10760 58.873 4.90e-97 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Accr5g01848 Myb_DNA-binding 1.8e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01848 - - qsa:O6P43_006330 420.239