Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01837 ATGGCATTGTCTTCTCTGGTTTCCACTCTCCAAAACGAAGAGAATTTCAAAGAAGAGACTGATTTCCCTGAGACTCAAATCGGAAACGAGGGCCTCACGAAACGCATCCTCAAAACAGGACTCTCATGGCAAATTCCATCTCCTGGAGACCAAGTCCAAGTTCATTTCAGAGGTCAGGTTCTTAATGGAGCATCCCTTCAATCAAGTTACGACCAAGGGACCCCATTTCGCTTCAACTTAGGCCAATATGAAGTTATCAAAGGCTGGGATGAAGGAGTTGCCACCATGAAGAAGGGAGAGAGAGCAGTCTTCAAAATACCACCAAACTTGGCGTATGGGGAGAAAGGTTCTCCGCCATTGGTTCCTCCCAATGCGACTCTCATCTTTGAGGTTGAGATGCTGTCTTGGATTACCATCAGGGACTTGACTGGTGATGGAGGAATCCTGAAAAAGATACTAAGGGAGGGAGAGGGATGGGAGACTCCTAGAGACGCCGACGAGGTCTTAGTGAAATATGAAGCAAGGCTAGAGAATGGAATGCTTGCTCATAAGTCTAATGAAGGTGTAGGGTTTACTATAAGTGATGGCCATCTTTGTCCTGCCATGAGTATAGCATTGAAAACAATGAGAAAAGGGGAGGAAGCAGAGCTCAGTTTAAGATTCTTTTATGGTGTGATACAAAATTCAAGTAGAAACAATGAAACCAACGGCAGCGCCCAACCAGATTCTAATTTAACAAGTCTAAGACTAGAGCTGGTATCATGGAAAACTGTAGTTGATGTCACAGGAGATAAGAAGATACTTAAGAAGATTGAGAGAGTTGGAGAGGGATTTGAGCGTCCTAATGAAGGATCACTAGTGAAAGTAACGTATACCAGTAAATTAGAAGATGGAACAATTATTGAGAGGAAAGGATCAGAGAAAGAACCTTTTGAGTTCACAACTCAGGAAGAACAAGCACCTGAGGGGCTAGAAAAAGCAATCATGACAATGAGAAAAGGAGAGGAAGCCACCGTGTCCATCGCCGCCGAATATTTATCTGATAAAATTAATCTTCCCACGACCCCAGCTAATAAAGTCCTTTATTATGAGGTCCAGTTGGTTGATTTCATCAAGGAGAAGCCATTTTGGAAAATGAACACTCAGGAAAAAATAGAAGCTGGTGAGAGGAAGAAGCATGACGGAAATTTATTGTTCAAGGCTGAAAAGTTCAGGCGTGCATCCAACAAATATGAAAAGGCTATAAAATGCATAGAGTTCGATCACTCATTCAGTGATGATGAGAAAAGCCAAGCCAATGCCTTACGGATATCTTGTTATTTGAACAATGCTGCTTGTAAACTTAAATTGGGGGAGTATACTGAAGCCTCAAAACTCTCTACTCGGGTTCTGGAACAAGATCCATTAAATGTGAAGGCACTGTACAGAAGATGCCAGGCATACCTGAAAACATCAGACTTAGATAAAGCTGAGGCTGACATTAAAAGAGCCCTCACTATTGATCCAAACAACAGAGACATGAGAGTGGAGTACAGGGAGCTGAAACTCAAGCAAAAGGAATACAGTAAATATGAAGCTGACATCTTCAGCTCAATGCTATCAAAGATGGGCTAA 1614 0.4232 MALSSLVSTLQNEENFKEETDFPETQIGNEGLTKRILKTGLSWQIPSPGDQVQVHFRGQVLNGASLQSSYDQGTPFRFNLGQYEVIKGWDEGVATMKKGERAVFKIPPNLAYGEKGSPPLVPPNATLIFEVEMLSWITIRDLTGDGGILKKILREGEGWETPRDADEVLVKYEARLENGMLAHKSNEGVGFTISDGHLCPAMSIALKTMRKGEEAELSLRFFYGVIQNSSRNNETNGSAQPDSNLTSLRLELVSWKTVVDVTGDKKILKKIERVGEGFERPNEGSLVKVTYTSKLEDGTIIERKGSEKEPFEFTTQEEQAPEGLEKAIMTMRKGEEATVSIAAEYLSDKINLPTTPANKVLYYEVQLVDFIKEKPFWKMNTQEKIEAGERKKHDGNLLFKAEKFRRASNKYEKAIKCIEFDHSFSDDEKSQANALRISCYLNNAACKLKLGEYTEASKLSTRVLEQDPLNVKALYRRCQAYLKTSDLDKAEADIKRALTIDPNNRDMRVEYRELKLKQKEYSKYEADIFSSMLSKMG 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01837 537 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 284 371 IPR001179 GO:0003755
Accr5g01837 537 Gene3D - 257 373 IPR046357 GO:0003755
Accr5g01837 537 SUPERFAMILY FKBP-like 260 390 - -
Accr5g01837 537 PANTHER PEPTIDYLPROLYL ISOMERASE 11 136 - -
Accr5g01837 537 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 165 256 IPR001179 GO:0003755
Accr5g01837 537 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 45 134 IPR001179 GO:0003755
Accr5g01837 537 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 160 231 IPR001179 GO:0003755
Accr5g01837 537 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 280 368 IPR001179 GO:0003755
Accr5g01837 537 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 49 137 IPR001179 GO:0003755
Accr5g01837 537 SMART tpr_5 471 504 IPR019734 GO:0005515
Accr5g01837 537 SMART tpr_5 437 470 IPR019734 GO:0005515
Accr5g01837 537 SMART tpr_5 388 421 IPR019734 GO:0005515
Accr5g01837 537 Gene3D Tetratricopeptide repeat domain 374 531 IPR011990 GO:0005515
Accr5g01837 537 FunFam Peptidyl-prolyl cis-trans isomerase 24 137 - -
Accr5g01837 537 SUPERFAMILY FKBP-like 17 138 - -
Accr5g01837 537 ProSiteProfiles TPR repeat profile. 471 504 IPR019734 GO:0005515
Accr5g01837 537 Gene3D - 7 139 IPR046357 GO:0003755
Accr5g01837 537 Pfam Tetratricopeptide repeat 471 504 IPR001440 GO:0005515
Accr5g01837 537 SUPERFAMILY TPR-like 377 533 IPR011990 GO:0005515
Accr5g01837 537 SUPERFAMILY FKBP-like 142 223 - -
Accr5g01837 537 Gene3D - 140 256 IPR046357 GO:0003755
Accr5g01837 537 FunFam Peptidylprolyl isomerase 376 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01837 Accr-Chr5 44664136 44667281 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01837 24 536 Calmodulin-binding Proteins AT5G48570 54.423 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01837 - - gmx:100785412 826.239