Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01836 ATGACTGAAACGTTTAAAAGGAGGGAAACCAACAACGGCTTATCCTCTCTACTTGAAACTCGGGAACTAGCTCTGTACTATCTTATGGACATATCAATGGCATTGTCTTCTCTGGTTTCCACTCTCCAAAACGAAGAGAATTTCAAAGAAGAGACTGATTTCCCTGAGACTCAAATCGGAAACGAGGGCCTCACGAAACGCATCCTCAAAACAGGACTCTCATGGCAAATTCCATCTCCTGGAGACCAAGTCCAAGTTCATTTCAGAGGTCAGGTTCTTAATGGAGCATCCCTTCAATCAAGTTACGACCAAGGGACCCCATTTCGCTTCAACTTAGGCCAATATGAAGTTATCAAAGGCTGGGATGAAGGAGTTGCCACCATGAAGAAGGGAGAGAGAGCAGTCTTCAAAATACCACCAAACTTGGCGTATGGGGAGAAAGGTTCTCCGCCATTGGTTCCTCCCAATGCGACTCTCATCTTTGAGGTTGAGATGCTGTCTTGGATTACCATCAGGGACTTGACTGGTGATGGAGGAATCCTGAAAAAGATACTAAGGGAGGGAGAGGGATGGGAGACTCCTAGAGACGCCGACGAGGTCTTAGTGAAATATGAAGCAAGGCTAGAGAATGGAATGCTTGCTCATAAGTCTAATGAAGGTGTAGGGTTTACTATAAGTGATGGCCATCTTTGTCCTGCCATGAGTATAGCATTGAAAACAATGAGAAAAGGGGAGGAAGCAGAGCTCAGTTTAAGATTCTTTTATGGTGTGATACAAAATTCAAGTAGAAACAATGAAACCAACGGCAGCGCCCAACCAGATTCTAATTTAACAAGTCTAAGACTAGAGCTGGTATCATGGAAAACTGTAGTTGATGTCACAGGAGATAAGAAGATACTTAAGAAGATTGAGAGAGTTGGAGAGGGATTTGAGCGTCCTAATGAAGGATCACTAGTGAAAGTAACGTATACCAGTAAATTAGAAGATGGAACAATTATTGAGAGGAAAGGATCAGAGAAAGAACCTTTTGAGTTCACAACTCAGGAAGAACAAGCACCTGAGGGGCTAGAAAAAGCAATCATGACAATGAGAAAAGGAGAGGAAGCCACCGTGTCCATCGCCGCCGAATATTTATCTGATAAAATTAATCTTCCCACGACCCCAGCTAATAAAGTCCTTTATTATGAGGTCCAGTTGGTTGATTTCATCAAGGAGAAGCCATTTTGGAAAATGAACACTCAGGAAAAAATAGAAGCTGGTGAGAGGAAGAAGCATGACGGAAATTTATTGTTCAAGGCTGAAAAGTTCAGGCGTGCATCCAACAAATATGAAAAGGCTATAAAATGCATAGAGTTCGATCACTCATTCAGTGATGATGAGAAAAGCCAAGCCAATGCCTTACGGATATCTTGTTATTTGAACAATGCTGCTTGTAAACTTAAATTGGGGGAGTATACTGAAGCCTCAAAACTCTCTACTCGGGTTCTGGAACAAGATCCATTAAATGTGAAGGCACTGTACAGAAGATGCCAGGCATACCTGAAAACATCAGACTTAGATAAAGCTGAGGCTGACATTAAAAGAGCCCTCACTATTGATCCAAACAACAGAGACATGAGAGTGGAGTACAGGGAGCTGAAACTCAAGCAAAAGGAATACAGTAAATATGAAGCTGACATCTTCAGCTCAATGCTATCAAAGATGGGCTAA 1710 0.4222 MTETFKRRETNNGLSSLLETRELALYYLMDISMALSSLVSTLQNEENFKEETDFPETQIGNEGLTKRILKTGLSWQIPSPGDQVQVHFRGQVLNGASLQSSYDQGTPFRFNLGQYEVIKGWDEGVATMKKGERAVFKIPPNLAYGEKGSPPLVPPNATLIFEVEMLSWITIRDLTGDGGILKKILREGEGWETPRDADEVLVKYEARLENGMLAHKSNEGVGFTISDGHLCPAMSIALKTMRKGEEAELSLRFFYGVIQNSSRNNETNGSAQPDSNLTSLRLELVSWKTVVDVTGDKKILKKIERVGEGFERPNEGSLVKVTYTSKLEDGTIIERKGSEKEPFEFTTQEEQAPEGLEKAIMTMRKGEEATVSIAAEYLSDKINLPTTPANKVLYYEVQLVDFIKEKPFWKMNTQEKIEAGERKKHDGNLLFKAEKFRRASNKYEKAIKCIEFDHSFSDDEKSQANALRISCYLNNAACKLKLGEYTEASKLSTRVLEQDPLNVKALYRRCQAYLKTSDLDKAEADIKRALTIDPNNRDMRVEYRELKLKQKEYSKYEADIFSSMLSKMG 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01836 569 Gene3D - 172 288 IPR046357 GO:0003755
Accr5g01836 569 ProSiteProfiles TPR repeat profile. 503 536 IPR019734 GO:0005515
Accr5g01836 569 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 316 403 IPR001179 GO:0003755
Accr5g01836 569 FunFam Peptidyl-prolyl cis-trans isomerase 56 169 - -
Accr5g01836 569 PANTHER PEPTIDYLPROLYL ISOMERASE 43 169 - -
Accr5g01836 569 SUPERFAMILY FKBP-like 174 255 - -
Accr5g01836 569 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 197 288 IPR001179 GO:0003755
Accr5g01836 569 FunFam Peptidylprolyl isomerase 408 563 - -
Accr5g01836 569 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 77 166 IPR001179 GO:0003755
Accr5g01836 569 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 192 263 IPR001179 GO:0003755
Accr5g01836 569 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 312 400 IPR001179 GO:0003755
Accr5g01836 569 Gene3D - 289 405 IPR046357 GO:0003755
Accr5g01836 569 SUPERFAMILY FKBP-like 292 422 - -
Accr5g01836 569 SUPERFAMILY FKBP-like 43 167 - -
Accr5g01836 569 Pfam Tetratricopeptide repeat 503 536 IPR001440 GO:0005515
Accr5g01836 569 SMART tpr_5 503 536 IPR019734 GO:0005515
Accr5g01836 569 SMART tpr_5 469 502 IPR019734 GO:0005515
Accr5g01836 569 SMART tpr_5 420 453 IPR019734 GO:0005515
Accr5g01836 569 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 81 169 IPR001179 GO:0003755
Accr5g01836 569 Gene3D - 39 171 IPR046357 GO:0003755
Accr5g01836 569 SUPERFAMILY TPR-like 409 565 IPR011990 GO:0005515
Accr5g01836 569 Gene3D Tetratricopeptide repeat domain 406 563 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01836 Accr-Chr5 44664136 44667377 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01836 56 568 Calmodulin-binding Proteins AT5G48570 54.423 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01836 - - gmx:100785412 828.165