Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01835 ATGTCTGAGAGAATGAATGTGGGAGGTGGTGAGGACAAAAAGATGAAACGTAAGCTCGAGGAGGATCATTATGAGACTGCGGAAGAACATTTTCTGTCTCTGTCGCTCTGCAACAACGCCGACATGTCGAAACCTTTGAAGGTGTCCCCGAAACCTGCTTCATCTAGTCCTGGTGATGGTGATGGTGATGACGATGATAAGAAGAAACCTGCATCAGAGGGAAGGTGGACGAAGGAATTTGGGTGCAGGTTCTGCGTAAAGAAGTTCAAAAGCTCGCAAGCTCTAGGAGGTCACCAGAATGCTCATAGGAAAGAGAGAGTCATCTACAAGATGGAGAGGGAACTCAGTACTTTTGGACACCCTAACTTTTGTCCCTGTTCCTCCATTATCACTCACAATAATCTCCCCAGACCAATAATCTCTCGTGCTCCTACTTCTGCTTCTGCTTCATCTTCAGCCTTCAATCCTCATTTTCATCTTCTTCATCATGCCATTGCGACTCATCACCACCATTTTCATCGTCAAGGCCAACCAATACCAAGTTTATCCTTTGGGATGAACACTTCTGGGAATATTCCAGACGTTGAGGAAAAGAAGCCTGATGTGCCCTCAGGTCTCGACTTGTCCCTCAGACTCTGA 639 0.4632 MSERMNVGGGEDKKMKRKLEEDHYETAEEHFLSLSLCNNADMSKPLKVSPKPASSSPGDGDGDDDDKKKPASEGRWTKEFGCRFCVKKFKSSQALGGHQNAHRKERVIYKMERELSTFGHPNFCPCSSIITHNNLPRPIISRAPTSASASSSAFNPHFHLLHHAIATHHHHFHRQGQPIPSLSFGMNTSGNIPDVEEKKPDVPSGLDLSLRL 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01835 212 ProSitePatterns Zinc finger C2H2 type domain signature. 82 102 IPR013087 -
Accr5g01835 212 ProSiteProfiles Zinc finger C2H2 type domain profile. 80 107 IPR013087 -
Accr5g01835 212 SUPERFAMILY beta-beta-alpha zinc fingers 78 108 IPR036236 -
Accr5g01835 212 Gene3D Classic Zinc Finger 67 118 - -
Accr5g01835 212 MobiDBLite consensus disorder prediction 1 22 - -
Accr5g01835 212 MobiDBLite consensus disorder prediction 43 73 - -
Accr5g01835 212 MobiDBLite consensus disorder prediction 58 73 - -
Accr5g01835 212 PANTHER ZINC FINGER PROTEIN 5 59 212 IPR044299 GO:0010090
Accr5g01835 212 MobiDBLite consensus disorder prediction 188 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01835 Accr-Chr5 44648584 44649222 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01835 63 144 C2H2 Transcription Factor Family AT1G67030 36.047 5.37e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01835 - - pcin:129305583 211.846