Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01821 ATGGGCCGGATTATGCTGCTCGTATCAGACTTCGTGTTGTCATTCATGTGGGTATGCTCAGGGGTTCTGATTAAGATGGGCGTAAACAAATATCTGGGTTTGATGAGTCGTGAGTCACTTCGTGAGATCGTGAAGATTGCGATCATCATTACTAACATGTTCTTCTTTACATTCCTCCGAATCATTACCCGTGGTGGCGCCTACAACCCACTCACTGTGTTGGCCAGTGCCATTTCTGGTGATTTCAGCAACTTCCTCTACTGCGTTGCTGCTAGAATTCCTGTTCAGGTAATTGGATCTATTATTGGGGTTAGGCTTATGATTGATAGCCTTCCGGAAGTAGGACGTGGACCACGTTTGAATATTGACATTCATCGAGGTGCTCTAATTGAAGGAATCCTAACATTTGCAATTGTTTCCATATCACTTCGGCTTGCCACAAAAATTCCCGAAGGCTTCTTCATGAAGACTTGGATCTCCAGTGTCTTCAAGCTTGCCCTTCACATACTTGGTTCTGATCTAACTGGTGGTTGTATGAACCCAGCCTCTGTAATGGGGTGGGCTTTTGCTCGAGGAGATCACATGACCAAGGAACACTTTGTTGTATACTGGCTTGCCCCTATGGAAGCCACTGTACTGGCAGTATGGACATTCAAATTGCTAGTTCGGCCTGTAAAAGAAGACAAATCAGGCACAAAAAATAAATTAGAATGA 714 0.444 MGRIMLLVSDFVLSFMWVCSGVLIKMGVNKYLGLMSRESLREIVKIAIIITNMFFFTFLRIITRGGAYNPLTVLASAISGDFSNFLYCVAARIPVQVIGSIIGVRLMIDSLPEVGRGPRLNIDIHRGALIEGILTFAIVSISLRLATKIPEGFFMKTWISSVFKLALHILGSDLTGGCMNPASVMGWAFARGDHMTKEHFVVYWLAPMEATVLAVWTFKLLVRPVKEDKSGTKNKLE 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01821 237 PANTHER AQUAPORIN SIP2-1-RELATED 1 236 IPR044226 GO:0015267
Accr5g01821 237 Pfam Major intrinsic protein 7 217 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr5g01821 237 Gene3D Glycerol uptake facilitator protein. 4 235 IPR023271 -
Accr5g01821 237 PRINTS Major intrinsic protein family signature 161 183 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr5g01821 237 PRINTS Major intrinsic protein family signature 130 148 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr5g01821 237 PRINTS Major intrinsic protein family signature 88 107 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr5g01821 237 PRINTS Major intrinsic protein family signature 5 24 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr5g01821 237 PRINTS Major intrinsic protein family signature 201 221 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr5g01821 237 SUPERFAMILY Aquaporin-like 6 228 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01821 Accr-Chr5 44542932 44544305 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01821 1 237 Major Intrinsic Protein MIP AT3G56950 57.384 2.18e-98 286