Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01802 ATGGCGAGCAGAAAGGAAGAAGAAAGAAACGAGAAGATTATTAGAGGGCTTATGAAGCTTCCGCCTAACCGGAGATGTATAAACTGCAATAGTATGGGTCCGCAATATGTCTGTACTACTTTCTGGACTTTCGTTTGCATGGCATGCAGTGGGATACATCGTGAGTTTACTCATCGAGTTAAGTCTGTATCTATGGCAAAATTCACTTCTCAGGAGGTAGAAGCTCTTCAGAATGGTGGCAACCAGCGTGCGAGGGACATATATTTGAAAGATTGGGATTTCCAAAGGCAGCGGATGCCAGATAGCAGCAATGCCGACAAAATAAGGGAGTTTATAAGGAATGTGTATATTGACAGAAGATATGCTGGGGCAAGGTCCTCTGACAAACCTCCAAGAGATACGCAGAGCCCTAGAATCCTTGGAGATGACACAAGGCGTGCTAGCTCTTATCATTCATATTCTCAAAGTCCTCCATATGATTACCAATATGAAGATCGACGGTATGGAAGACAAGCAGCTGCATTGACCAGGAAGCCTGGCTCAGATAAAGGTCGCTATGAAGGGAAGATGTCTAGTATTATTTATAGTCCTGGGCGCTTCAGTGACCATGCATCTGAGGATGGCTTTGCCAATGAGGGATCTGGTCCAAGAATTTCAGACTATTCTATGTCTAGTGCTGGTGAACAATTCAAATCTGCTGTGCATTCTCCCAAGTTTTTTAGGGACATGCAAAACAGTCCATTCCATCAGCGTTCTAGAACTGGTTCAAGTGAAGATGTATTTTCTCCATCACGGTTTACATCTCTGGAAACAGTTGTCAAGGGTGATTCAGATGGACATCATCCACAGAGAACCACAGCACAGGGATCAACTGCCTGCAATCCATCATCCCATAGATCTTACAGTTCTGGTGGTCTAGATTTATTTTCGGAGCCTGTCCAAGCTTCGGGATCCAATCAAGATAAGGTGTCTACCATACCAGTATCACAACAAGCACGTCCACCAAGATCAGTTAGCTTGGATCTTTCAAAGGCAGCAATGGCATCTGAGCCGTTGCCCTCCTTAATGCCGCCTATTGATCTTTTTGAGTTTCCAGCATCATCTCAGGCTCCACCAGTGGATTTGTTTCAACCATCTATTTTGTCTTCAGCTCCTTCTTCAAATGAAAATCAACCTTCGCAAACATCTCAGCCCTCACCTGTCGACTACTTTGCAGATGTTTCTGAGCAGCAGCCTGCTGCTCCATCAGTTGAGAAGTCACCAGAGTTCTTTGCCCCTAAAAATGAAGGATGGGCAACATTTGATATCCCTCAGCAATCGGCATCTCATGCACGAGTTGAAATTCCAGCAGGAGTTCCTTCAACTGATAAGTCTTTGCTGGAATTATTTGATCCATTTTCAACAGCAAATGCCAGCCAGCAGTGGCCATCTTTTGACACTTCTGGTGTTCATGAACCTTCAATCACTTCTTATGCATGGCATGGCAGTGTTCAGAACGGAGAACAAGCTTCCATTGCTGCTGAAAATGCTCAACCATGGAATGCATTTGAAAATTCTGGTTCCCACCTTCCTGTTGATGCTGTTAATCAAGAGTTGCAATTGCATAATCCTCCATCAAGTGTTGATCAATTTTTAAGCTCAAAAGTTTCTGAGGATTCCAAAGGTGGGGTGCAAGACTTTGCCCCTATTGATGCATTCAATGATAATATTCAATCAGATGTTAATGGTTTACCATTTCCTCCAGCTGTGCTTCCTGTGATGGAAGAGACTCAGCGCAGTGCAACCAACCAGAAATCAACTAATCCGTTTGATCTTCCCTTTGAATCTGATGTAGAGCACAACAATATGTTCCTTGATCTGAGCTCATTGCAAACTGCTCTGCCAGATTCCCAGTTGGCTTCTCCATACCATGGTGGTAATGTTATAGCGGAACCATGGCTCCCGCAAAGTGTGACCCCATATATTTCTTCTGCAGGACAAGGTGGTCTAACGTTCATGGCTGCGCAACCACCAAGCTCTCAAATACCGAACATCCAGACGCAGGGACCAGTTGCATCTTTTGGGGGCAATCCTTTTGCGTAG 2082 0.4452 MASRKEEERNEKIIRGLMKLPPNRRCINCNSMGPQYVCTTFWTFVCMACSGIHREFTHRVKSVSMAKFTSQEVEALQNGGNQRARDIYLKDWDFQRQRMPDSSNADKIREFIRNVYIDRRYAGARSSDKPPRDTQSPRILGDDTRRASSYHSYSQSPPYDYQYEDRRYGRQAAALTRKPGSDKGRYEGKMSSIIYSPGRFSDHASEDGFANEGSGPRISDYSMSSAGEQFKSAVHSPKFFRDMQNSPFHQRSRTGSSEDVFSPSRFTSLETVVKGDSDGHHPQRTTAQGSTACNPSSHRSYSSGGLDLFSEPVQASGSNQDKVSTIPVSQQARPPRSVSLDLSKAAMASEPLPSLMPPIDLFEFPASSQAPPVDLFQPSILSSAPSSNENQPSQTSQPSPVDYFADVSEQQPAAPSVEKSPEFFAPKNEGWATFDIPQQSASHARVEIPAGVPSTDKSLLELFDPFSTANASQQWPSFDTSGVHEPSITSYAWHGSVQNGEQASIAAENAQPWNAFENSGSHLPVDAVNQELQLHNPPSSVDQFLSSKVSEDSKGGVQDFAPIDAFNDNIQSDVNGLPFPPAVLPVMEETQRSATNQKSTNPFDLPFESDVEHNNMFLDLSSLQTALPDSQLASPYHGGNVIAEPWLPQSVTPYISSAGQGGLTFMAAQPPSSQIPNIQTQGPVASFGGNPFA 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01802 693 Gene3D Arf GTPase activating protein 1 131 IPR038508 -
Accr5g01802 693 PRINTS HIV Rev interacting protein signature 23 42 IPR001164 GO:0005096
Accr5g01802 693 PRINTS HIV Rev interacting protein signature 42 59 IPR001164 GO:0005096
Accr5g01802 693 PRINTS HIV Rev interacting protein signature 60 81 IPR001164 GO:0005096
Accr5g01802 693 MobiDBLite consensus disorder prediction 243 339 - -
Accr5g01802 693 SUPERFAMILY ArfGap/RecO-like zinc finger 9 122 IPR037278 -
Accr5g01802 693 CDD ArfGap_AGFG 11 121 - -
Accr5g01802 693 PANTHER ARFGAP/RECO-RELATED 1 693 IPR044820 GO:0005096
Accr5g01802 693 MobiDBLite consensus disorder prediction 122 164 - -
Accr5g01802 693 ProSiteProfiles ARF GTPase-activating proteins domain profile. 11 129 IPR001164 GO:0005096
Accr5g01802 693 SMART arf_gap_3 11 129 IPR001164 GO:0005096
Accr5g01802 693 MobiDBLite consensus disorder prediction 243 271 - -
Accr5g01802 693 MobiDBLite consensus disorder prediction 373 401 - -
Accr5g01802 693 Pfam Putative GTPase activating protein for Arf 12 122 IPR001164 GO:0005096
Accr5g01802 693 MobiDBLite consensus disorder prediction 282 337 - -
Accr5g01802 693 FunFam Arf-GAP domain and FG repeat-containing protein 1 1 134 - -
Accr5g01802 693 MobiDBLite consensus disorder prediction 122 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01802 Accr-Chr5 44310972 44316965 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01802 14 116 C2H2 Transcription Factor Family AT4G05330 31.579 6.56e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01802 K15044 - gmx:100794964 796.964