Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01784 ATGGATACCGTAGTCCCTCTGTCTAATCGCGCGGGTTATGTTTTGTTCTTGAACGTATCGTTCGTCTTACTGGCTTGTGTGTTCGGGATTATCAATTTTCACTCCAAAGAACTACTTGTTCTTGGCCATCGTGGCGGGAACCAGCAGGATTGCCACGACTTTGTGAAACTGGAAGATTACAGGGCCAAATGTTTGCACCTTCAATCCAATAATCCATGCGTCTCGCAGGGCTTTTTTGACTATCTTTACCTTTTCTATTGCAAATTTGGGCGATTCCCATTGTTGGGCCATGTTCTTCTGTTCCTCTGGCTTCTTGTTCTGTTTTATCTGATGGCTGATACGGCTTCTGAGTACTTCTGTCCTTCACTTGAAAACCTATCCAAGTTACTGAAGCTATCCCCTATGATTGCCGGCGTGACGCTTCTTTCTCTCGGCAATGGAGCCTCCGACGTTTTCGCCAGCCTCGTCTCCTTCAACAGCAGTGATACGAGCGACCTTGGCTTCAACACTGTACTTGGCGGTGCTTCGTTTGTGTCCTGTGTCGTGGTAGGAGTAGTAAGCATTTCTTTACGGCACAGGAGAATTCAAGTTAACAAGTCTGCCTTTATTAGAGATGCTTGTTTTCTTCTCTTGGTCCTCCTTTGCTTGTTAACCATTTTTATCAGCGGTGAGATCAACGTTCTAGGTGCAATATGTCTCTGTTCCATGTATATAGTTTATGCAGTTTTTGTTTATATCTCATCTACCCGCTGGAAAGGTGTTTGTGGAGATACTGAAAGGGAAAGTGATTTAAGTTATAACAGTGACTTGAGTGTGCCCATTCTTAGTGGTATAGAAAAAGGAATATCTGAAATTGTAGAGGAAGGTTCTCGAGAAGATTGCCAGGAAACTAATAAAAATTGCTGCTGCATGAGATCTCCAATATGTTTAGTGTTACTTTCTATCCTGAAGATGCCACTTTACTTGCCCCGGAGATTAACAATTCCAGTTGTTTGTGAAGAGAGATGGTCCAAGCCATTTGCTATTTCTTCAGCTGTACTAGCACCTCTTCTGTTGTCTGCCTTGTGGATCTTTTGTGAGGGAGATACTACAACCAATACAAGCCTAACAGTTTATGGAATTGGATTATTGATTGGGATCATACTTGGGATCGCTGTGTTTTTCACAGCAGAGAAGTCAAGTCCCCCAAAGAAATGTCTGTTTCTATGGCTTGCAGGAGGATTTGTGATGAGCGTGACCTGGAGCTATATTTCAGCTCAGGAGTTGGTGGCACTGTTGGTTTCACTTGGCTATATAAGTGGAATAAGTCCTTCAATGCTGGGGCTAACAGTTCTTGCATGGGGAAATTCAATTAGTGATTTGATGACAAATTTAACTGTGGCATTATATGGGGGACCTGAAGGTGCTCAGATAGCAATATCTGGTTGCTATGCAGGCCCCATTTTTAATACTCTCATTGGCCTGGGCTTGTCTCTGGTAAGTTCAACTTGGTCACAATACCCATCTTCTGTTGTGATTCCTAGTGATCCATATCTGCTGGAGACTCTGGCATTTCTGGTGGGTGGATTGGCTTGGGCTCTTGTGGTTTTGACAACCAGAGATATGAGGCTTGATGGAGTGTTAGGTGGAGGACTTTTGGTTATTTACTTCACTTCTGTGTTTCTGAGGCTGATTCAGACACTCGGCCCTCTCCAACTCCCAAGTTCGTGGTGA 1713 0.4378 MDTVVPLSNRAGYVLFLNVSFVLLACVFGIINFHSKELLVLGHRGGNQQDCHDFVKLEDYRAKCLHLQSNNPCVSQGFFDYLYLFYCKFGRFPLLGHVLLFLWLLVLFYLMADTASEYFCPSLENLSKLLKLSPMIAGVTLLSLGNGASDVFASLVSFNSSDTSDLGFNTVLGGASFVSCVVVGVVSISLRHRRIQVNKSAFIRDACFLLLVLLCLLTIFISGEINVLGAICLCSMYIVYAVFVYISSTRWKGVCGDTERESDLSYNSDLSVPILSGIEKGISEIVEEGSREDCQETNKNCCCMRSPICLVLLSILKMPLYLPRRLTIPVVCEERWSKPFAISSAVLAPLLLSALWIFCEGDTTTNTSLTVYGIGLLIGIILGIAVFFTAEKSSPPKKCLFLWLAGGFVMSVTWSYISAQELVALLVSLGYISGISPSMLGLTVLAWGNSISDLMTNLTVALYGGPEGAQIAISGCYAGPIFNTLIGLGLSLVSSTWSQYPSSVVIPSDPYLLETLAFLVGGLAWALVVLTTRDMRLDGVLGGGLLVIYFTSVFLRLIQTLGPLQLPSSW 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01784 570 Pfam Sodium/calcium exchanger protein 101 245 IPR004837 GO:0016020|GO:0055085
Accr5g01784 570 Pfam Sodium/calcium exchanger protein 404 556 IPR004837 GO:0016020|GO:0055085
Accr5g01784 570 Gene3D - 310 557 IPR044880 -
Accr5g01784 570 Gene3D - 132 261 IPR044880 -
Accr5g01784 570 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 17 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01784 Accr-Chr5 44119320 44121032 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01784 8 562 Antiporters AT5G17850 54.336 2.87e-171 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01784 K13754 - qsa:O6P43_006226 694.886