Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01783 ATGGCAACTTTCTTCTTCCCCACCTCTAAACCTCAGCCCAGAAAACTTGCCACCATTTTCATCAACATCTCCTTCATCTTCCTCATCTTTCTCTTCCTCAAAGCCTATCTCTCTGCCTCCAATTCCAATCATTCTCTCAACCAGTATTTCCATGGCTCCTCTGCAACCATCTTTAAACGCCCTCGGACTCTGCCTCGGCTACAAACTAATGAATGTTCCGATCTCCATGAGCACTCAGACCTCAGTTCAAAGTGTTCGTACGTCAAGACCAATCTCAACTGTAATTCCAGAGGGTACATAAACTATCTTCAGATCTTTTACTGCAATCTTGGGCAATTTCCAGTTTTGGGTTATGCTCTGCTTGCTTTATGGCTCTTGGTATTGTTCTATCTCTTGGGCGACACAGCGTCAAACTACTTCTGTCATTCCTTGGAAGGTTTGTCCAGTATCTTGAGGCTATCTCCGCCCATAGCCGGAGTAACACTACTTTCTCTGGGAAATGGTGCGCCTGATTTTTTTGCCAGTGTTGCTTCTTTCACCAGATCCAGCGGCGGCGCCGTCGGCCTCAATAGCATCCTAGGAGGTGCTCTTTTTATTTCTAGCACCGTTTTGGGGATTATAAGTATTCTGGTCAGCCCAAAGAAGATTACAGTTGATAAGGTTAGTTTCATCAGAGATGTTGGTTTCCTCCTATTTTCTCTGTTCAGCCTAACGGTGATCATTTACATCGGTAAAATCAACTTGTGGGGTTCAATATGCTATATTTCTATCTACTTCATTTATGTTGGCGCCGTCTCAGTTCCTCATTTCATGAACAAAAGGGAAAAGATTGAAAAAGTTGCAGTATTATCAAACGACTTGGCACTAGCAGATTCTTCCATACCATTGTTGGGCTTTGTAGATAGTGAGAAAGGGGAAACAAAAGTAGCAGAACAAGCAGGTGTTGCTGAAGATGAAATGGAAGATCCTGTAAGTTCTGACAAAGTGTCACTCAATTGTATATACCTAAGGAAGTTTTTGAATGCTCTAGAACTACCCCTTTCACTGCCAAGAACACTAACAATACCCATTGTGAGTGAGGAAAAATGGTCCAAGCCATATGCGGTGATATCTGTCACATTAGCCCCACTTGTATTTGTAGCTGTTTGTGACGCCCAATTGGAAGATCTGAGTAAAAATAGCAACTTGATCAAGTACTTGCCAGCTGCTATAGCTGGTTTTGTTTTGGGATGTGTTACATGTGTGACTACCAAGAGTTCGAGTCCACCAAAGAAGTGCTTGTTTGCATGGCTAGCAGGGGGATTTGCAATGAGTGTGTTATGGACTTACATTATTGCAGATGAATTGGTGTCCCTCTTGTATTCACTGGGACACATAATTGGGATAAGCCCTTCTATTCTAGGGTTAACTGTCCTAGCTTGGGGTAACTCAATAGGGGATTTGATATCTAATAGTGCGATGGCTCTAAATGGTGGTGAAGATGGGGTCCAAATAGCCATATCAGGTTGTTATGCAGGTCCTATGTTCAATACATTAATGGGTTTAGGGTTGCCCCTGGTTCTCTCAGCTTGGTCTGAGTATCCATTATCTTATGAGATTCCTAAAGATCATTCTTTGTACGAGACTCTTCTGTTCTTGACGGCTGGGCTACTATGGGCACTTGTGATTTTGCCCAACAGGAACATGAAATTGGATAAGGTTTTGGGAACTGGACTTTTGGCCATATACCTCTGCTTTCTCTTCATCAGGCTAGCCGCGGCCATTGTTGTTGTTAATTTATAG 1782 0.4287 MATFFFPTSKPQPRKLATIFINISFIFLIFLFLKAYLSASNSNHSLNQYFHGSSATIFKRPRTLPRLQTNECSDLHEHSDLSSKCSYVKTNLNCNSRGYINYLQIFYCNLGQFPVLGYALLALWLLVLFYLLGDTASNYFCHSLEGLSSILRLSPPIAGVTLLSLGNGAPDFFASVASFTRSSGGAVGLNSILGGALFISSTVLGIISILVSPKKITVDKVSFIRDVGFLLFSLFSLTVIIYIGKINLWGSICYISIYFIYVGAVSVPHFMNKREKIEKVAVLSNDLALADSSIPLLGFVDSEKGETKVAEQAGVAEDEMEDPVSSDKVSLNCIYLRKFLNALELPLSLPRTLTIPIVSEEKWSKPYAVISVTLAPLVFVAVCDAQLEDLSKNSNLIKYLPAAIAGFVLGCVTCVTTKSSSPPKKCLFAWLAGGFAMSVLWTYIIADELVSLLYSLGHIIGISPSILGLTVLAWGNSIGDLISNSAMALNGGEDGVQIAISGCYAGPMFNTLMGLGLPLVLSAWSEYPLSYEIPKDHSLYETLLFLTAGLLWALVILPNRNMKLDKVLGTGLLAIYLCFLFIRLAAAIVVVNL 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01783 593 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 23 591 - -
Accr5g01783 593 Gene3D - 153 284 IPR044880 -
Accr5g01783 593 Gene3D - 366 585 IPR044880 -
Accr5g01783 593 Pfam Sodium/calcium exchanger protein 122 263 IPR004837 GO:0016020|GO:0055085
Accr5g01783 593 Pfam Sodium/calcium exchanger protein 431 584 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01783 Accr-Chr5 44105936 44107717 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01783 68 592 Antiporters AT5G17860 50.851 1.95e-168 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01783 K13754 - gmx:100818583 704.901