Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01782 ATGGCTACTCTCTTCCTCCCCACCTCCAAACCTCAGCTCAGAAAACTTGCCGCCATTTTCTTCAACATCTCCTTCATCTTCCTCGTCTGTCTCTTCATCAAAGCCCATCTTTCTCTATCCAATTTCAATCATGCTCTCAACCAGCATTCACATAGCCCCTCTGCAACCATTTTTAACCGCCTTCGGACTCTGCCTCGCCTCCAATCTAATGAATGCTCCGATCCCCACGAGCAATCAGACCTCAGTTCAAAGTGTTCGTACGTCAAGGCCAATCTAAACTGTAATTCCAGAGGGTACATAAACTATCTTCAGATCTTTTACTGCAATCTTGGGCAATTTCCAGTTCTGGGTTATGCTCTGCTTGCTTTATGGCTCTTGGTCTTGTTCTATCTCTTGGGCGACACAGCTTCAAACTACTTCTGTCATTCCTTGGAAGATTTGTCCAGTATCTTGAGGCTATCTCCGACCATAGCCGGAGTAACATTGCTTTCTCTGGGAAATGGAGCGCCTGATTTTTTTGCAAGTGTTGCTTCTTTCACCAGATCCAGCGGCGGCGCCGTCGGCCTCAATAGCATCCTAGGAGCTGCTCTTTTTGTTTCTACCACCGTTTTGGGGATTATAAGTATTCTGGTTAGCCCAAAGAAGATTACAGTAGATAAGGTTAGTTTCATCAGAGATGTTGGTTTCCTCCTATTTTCTCTGCTCGGCCTAACGGTGATCATTTACATCGGTAAAATCAACTTGTTGGGTTCAATATGCTATATGTCTATCTACTTCATTTATGTTTGTGTCGTCTCAGTTCCTCATTTCATGAACAAATGGGAAAAGAAAGAAGAAGTTGCAGAATCTTCAGATGACTTGGCACGGGCAGATTCTTCCGAACTATTGTTGGGCGTTGTAGATAGAAAGAAAAGGGAAATAGAAGTAACAGAGCAAGCAGGTGTCGCTGAAGATGAAATGAAAGATCCGGAAAGTTTTGACGAAGTTTCACTCAATCGTACATACCTAAGGAAGTTTTTGAAAGCACTAGAACTACCCCTTTCACTGCCAAGAAGGCTAACAATACCCATTGTGAGTGAGGAAAAGTGGTCCAAGCCATATGCGGTGATATCTGTCACATTAGCCCCACTTGTATTTGCAACTGCTTGTGATACCCAATTGGAAAACCTGAGTAAAAATAGCAACTTGATCAAGTACTTGCCAGCTGCTATAGCTGGTTTTGTTTTGGGCTGTGTTACATGTGTGAAGACCAAGAGTTCGGGTCCACCAAAGAAGTGCTTGTTTGCTTGGCTAGCAGGGGGATTTGCAATGAGTGTGTTATGGATTTACATTATTGCAGATGAATTGGTGTCCCTCTTGTATTCACTAGGACACATAATTGGGGTAAGCCCTTCTATCCTAGGGTTAACTGTCCTAGCTTGGGGTAACTCAATAGGGGATTTGATAGCTAATAGTGTGATGGCTCTAAATGGTGGTGAAGATGGGGTCCAAATAGCCATATCAGGTTGCTATGCAGGTCCTGTGTTCAATACATTGATGGGTTTAGGGTTGCCTCTAGTTCTGTCAGCTTGGTCTGAGTATCCATTATTTTATGAGATTCCTAAGGATCTTTCTCTGTACAAGACTCTCCTGTTCTTGACGGCTGGACTACTATGGGCACTTGTGATTTTACCAAACAGGAACATGAAGTTGGATAAGGTTTTGGGAACTGGACTTTTGGCCATATACCTCTCCTTTCTCTTCATCAGGATAGCCACGAACATTGGTGTATTTAATTTATAG 1782 0.4321 MATLFLPTSKPQLRKLAAIFFNISFIFLVCLFIKAHLSLSNFNHALNQHSHSPSATIFNRLRTLPRLQSNECSDPHEQSDLSSKCSYVKANLNCNSRGYINYLQIFYCNLGQFPVLGYALLALWLLVLFYLLGDTASNYFCHSLEDLSSILRLSPTIAGVTLLSLGNGAPDFFASVASFTRSSGGAVGLNSILGAALFVSTTVLGIISILVSPKKITVDKVSFIRDVGFLLFSLLGLTVIIYIGKINLLGSICYMSIYFIYVCVVSVPHFMNKWEKKEEVAESSDDLARADSSELLLGVVDRKKREIEVTEQAGVAEDEMKDPESFDEVSLNRTYLRKFLKALELPLSLPRRLTIPIVSEEKWSKPYAVISVTLAPLVFATACDTQLENLSKNSNLIKYLPAAIAGFVLGCVTCVKTKSSGPPKKCLFAWLAGGFAMSVLWIYIIADELVSLLYSLGHIIGVSPSILGLTVLAWGNSIGDLIANSVMALNGGEDGVQIAISGCYAGPVFNTLMGLGLPLVLSAWSEYPLFYEIPKDLSLYKTLLFLTAGLLWALVILPNRNMKLDKVLGTGLLAIYLSFLFIRIATNIGVFNL 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01782 593 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 23 591 - -
Accr5g01782 593 Gene3D - 367 585 IPR044880 -
Accr5g01782 593 Gene3D - 153 283 IPR044880 -
Accr5g01782 593 Pfam Sodium/calcium exchanger protein 122 265 IPR004837 GO:0016020|GO:0055085
Accr5g01782 593 Pfam Sodium/calcium exchanger protein 431 584 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01782 Accr-Chr5 44100318 44102099 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01782 48 592 Antiporters AT5G17860 48.535 1.28e-164 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01782 K13754 - gmx:100818583 695.271