Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01781 ATGGCTACTCTCTTCCTCCCCACCTCCAAACCTCAGCCCAGAAAACTTGCCGCCATTTTCTTCAACATCTCCTTCATCTTCCTCGCCTTTCTCTTCCTCAAAGCCTATCCTTCTCAATCCAATTTCAATGCTCTCAACCAGCATTCGCACAGCCCCTCTGCAACCATTTTTAACCGCCTTCGGACTCTGCCTCGCCTCCTAACTAATGAATGCTCCGATCTCCACGAGCACTCAGACCTCAGTTCAAAGTGTTCGTACGTTAAGGCCAATCTAAACTGTAATTCCAGAGGGTACATAAACTATCTTCAGATCTTTTACTGCAATCTTGGGCAATTTCCAGTTCTGGGTTATGTTCTGCTTGCTTTATGGCTCTTGGTATTGTTCTATCTCTTGGGCGACACAGCCTCAAACTACTTCTGTCATTCCTTGGAAGGTTTGTCCAGTATCTTGAGGCTATCTCCGACCATAGCCGGAGTAACATTGCTTTCTCTGGGAAATGGTTCGCCTGATTTTTTTGCAAGTGTTGCTTCTTTCACCAGATCCAGCGGCGGCGCCGTCGGCCTCAATAGCATCCTAGGAGCTGCTCTTTTTGTTTCTACCGCCGTTTTGGGGATTATAAGTATTCTGGTCAGCCCTGAGAAGATTACAGTTGATGAGGTTAGCTTCATTAGAGATGTTGGTTTCCTCCTATTTTCTCTGTTCAGCCTAACGGTGATCATTTACATCGGTAAAATCAACTTGTGGGGTTCAATATGCTATATCTCTATCTATATCATTTATGTTTGTGCCGTCTCAGTTCCTCATTTCATGAAAAAAAGGGAAAAGGAAGAAGAAGTTGCAGAATCTTCATATGACTTGGCACGGGCAGATTCTTCCAAACAATTGTTGGGCTCTGTAGATAGAAAGAAAGGGGAAACAGAAGTAACAGAGCAAGCAGGTGTCGCTGAAGATGAAATGGAAGATCCGGAAAGTTTTGACGAAGTTTCACTCAATTCTACATACCTAAGGAAGTTTTTGAAAGCACTAGAACTACCCCTTTCACTGCCAAGAAGGCTAACAATACCCATTGTGAGTGAGGAAAAGTGGTCCAAGCCATATGCGGTGATATCTGTCACATTAGCCCCACTTGTATTTGCAACTGTTTGTGATACCAAATTGGAAAACCTGAGTAAAAATAGCAACTTGATCAGGTACTTGCCGGCTGCTGCAGCTGGTTTTGTTTTGGGGTGTGTTACATGTGTGAAGACCAAGAGTTCGAGTCCACCAAAGAAGTGCTTGTTTGCTTGGCTAGCAGGGGGATTTGCAATGAGTGTGCTATGGACTTACATTATTGCAGATGAATTGGTGTCCCTCTTGTATTCACTGGGACACATAATTGGGGTAAGCCCTTCTATCCTAGGGTTAACTGTCCTAGCTTGGGGTAACTCAATAGGGGATTTGATAGCTAATAGTGTGATGGCTCTAAATGGTGGTGAAGATGGGGTCCAAATAGCCATATCAGGTTGCTATGCAGGTCCTGTGTTCAATACATTGATGGGTTTAGGGCTGCCTCTAGTTCTCTCAGCTTGGTCTGAGTATCCATTATCTTATGAGATTCCTAAGGACCTTTCTCTGTACAAGACTCTTTTGTTCTTGACGAGTGGGCTGCTATGGGCACTTGTGATTTTACCAAACAGGAACATGAAGTTGGATAAGGTTTTGGGAACTGGACTTTTGGCTGTATACCTCTCCTTTCTCTTCATCAGGATAGCCACGGCCATTGGTGTTGTTAATTTATAG 1779 0.4401 MATLFLPTSKPQPRKLAAIFFNISFIFLAFLFLKAYPSQSNFNALNQHSHSPSATIFNRLRTLPRLLTNECSDLHEHSDLSSKCSYVKANLNCNSRGYINYLQIFYCNLGQFPVLGYVLLALWLLVLFYLLGDTASNYFCHSLEGLSSILRLSPTIAGVTLLSLGNGSPDFFASVASFTRSSGGAVGLNSILGAALFVSTAVLGIISILVSPEKITVDEVSFIRDVGFLLFSLFSLTVIIYIGKINLWGSICYISIYIIYVCAVSVPHFMKKREKEEEVAESSYDLARADSSKQLLGSVDRKKGETEVTEQAGVAEDEMEDPESFDEVSLNSTYLRKFLKALELPLSLPRRLTIPIVSEEKWSKPYAVISVTLAPLVFATVCDTKLENLSKNSNLIRYLPAAAAGFVLGCVTCVKTKSSSPPKKCLFAWLAGGFAMSVLWTYIIADELVSLLYSLGHIIGVSPSILGLTVLAWGNSIGDLIANSVMALNGGEDGVQIAISGCYAGPVFNTLMGLGLPLVLSAWSEYPLSYEIPKDLSLYKTLLFLTSGLLWALVILPNRNMKLDKVLGTGLLAVYLSFLFIRIATAIGVVNL 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01781 592 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 22 590 - -
Accr5g01781 592 Pfam Sodium/calcium exchanger protein 430 583 IPR004837 GO:0016020|GO:0055085
Accr5g01781 592 Pfam Sodium/calcium exchanger protein 121 263 IPR004837 GO:0016020|GO:0055085
Accr5g01781 592 Gene3D - 367 585 IPR044880 -
Accr5g01781 592 Gene3D - 152 281 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01781 Accr-Chr5 44073217 44074995 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01781 68 591 Antiporters AT5G17860 49.811 5.29e-165 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01781 K13754 - gmx:100818583 695.271