Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01751 ATGAACGATCTTCTATCGGGATCATTTGAAATCCAACGTGGGCAAGGAAATGGGGACGTCGAGTTGGGGTCATATTTACGGACTTCAGGAGAACTGAGTTTGGATCTATTCTTCAAAAAGGTTCAAGAGTTTGATAAACAATTTGAGAGGCTGGGTAAGCTTCTCAGACGGCTCCAGGATGCCCACGAGGAGTCCAAAGCAGTGACCAAAGCTCCTGCCATGAAGGATATTAAGCAGAGAATGGAGAAAGATGTTGATGAAGTCAAGAAAATTGCCTATCACATAAAAACAAGAATTGAAGAATTGAACAGAGAAAACCTGGAAAACAGGCAAAAGCATGGGTGTGGAGAAGGAACAGGTATCGACAGGTCAAGAATAGCAACCACCATTGCCTTAAAAAAGAAATTGAAGGACAAGATGGATGAATTTCAGAGGATGAGGGAAATCATACATCAAGAATATCGTGAGGTTTTAGAGAGGCGTGTTTATACAGTGACGGGCACAAGAGCTGATGAGGAGACAATTGACAGATTAATTGAGACTGGAGATGGTGAACAGATTTTCCAGAATGCAATTAAGGAACAAGGACGAGGCCAGGTACTAGACACCCTAGCAGAGATTCACGAACGGCACGAAGCAGCTAGAGACGTTGAGAAGAAAATTCTTGATTTGCAGCAGATATATCTTGATTTGGCAGTGCTGGTTGATTCACAGGGAGACATTCTTAACAACATAGAATCCCAGGTATCAACTGCAGTAGATCACGTGCAGCAAGGCAATAATGCACTAGTGAAAGCAAAGAAGGCGCAGAAGAATACGAGAAAATGGATGTGCATTGCTATAATAATACTTCTTGCTGTTGTTGCGATCGTTCTTACTTCTGTCCTCAAAACTTGGACTGACAAAAGAGGAGCCTAG 918 0.4248 MNDLLSGSFEIQRGQGNGDVELGSYLRTSGELSLDLFFKKVQEFDKQFERLGKLLRRLQDAHEESKAVTKAPAMKDIKQRMEKDVDEVKKIAYHIKTRIEELNRENLENRQKHGCGEGTGIDRSRIATTIALKKKLKDKMDEFQRMREIIHQEYREVLERRVYTVTGTRADEETIDRLIETGDGEQIFQNAIKEQGRGQVLDTLAEIHERHEAARDVEKKILDLQQIYLDLAVLVDSQGDILNNIESQVSTAVDHVQQGNNALVKAKKAQKNTRKWMCIAIIILLAVVAIVLTSVLKTWTDKRGA 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01751 305 CDD SNARE_syntaxin1-like 203 265 - -
Accr5g01751 305 Coils Coil 133 153 - -
Accr5g01751 305 SMART tSNARE_6 199 266 IPR000727 -
Accr5g01751 305 SUPERFAMILY t-snare proteins 33 259 IPR010989 GO:0016020|GO:0016192
Accr5g01751 305 FunFam Syntaxin 132 197 297 - -
Accr5g01751 305 Coils Coil 41 61 - -
Accr5g01751 305 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 204 266 IPR000727 -
Accr5g01751 305 SMART SynN_4 29 155 IPR006011 GO:0016020
Accr5g01751 305 PANTHER SYNTAXIN 38 284 IPR045242 -
Accr5g01751 305 Gene3D - 31 158 - -
Accr5g01751 305 Gene3D - 197 298 - -
Accr5g01751 305 Pfam SNARE domain 241 292 IPR000727 -
Accr5g01751 305 CDD SynN 34 191 IPR006011 GO:0016020
Accr5g01751 305 Pfam Syntaxin 37 239 IPR006011 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01751 Accr-Chr5 43761457 43770379 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01751 1 305 SNARE and Associated Proteins AT3G03800 68.301 2.49e-146 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01751 K08486 - gmx:100306329 453.366