Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01725 ATGGATGTTTGCCGGAATGCTTCAGTTTCCGGCGACTGCGAACAAGAGCAGGTCCTCTTGTCTTCCTGCTCAAAGCTTTCAACCTTCTCAACCACTCTTGATGACCTCTTCTCTTCTCATAACACGGAAGTGGATGTTGGCTTAGAATGGCTTTCAGTATTTGTGGAAGACTGTTTTTCCAGCTCAGCATGTTGCCTCTTGGCGCCTACTGATGCCAAAAACATAGAGGCAAACTCTAAGTCCTCCGTACAATTACAGAGAACCCAGCAAAAGCAGTCTCCTCTGCAAAGTTTTGCAGTGCCTGGTAAGGCGAGAAGCAAAAGGAAAAGGCTTTCAGCCCCAAGAACCAAGAACCCATTAAGCAGCTGGTCACACCATTTGAACCCACAAAATGAACCCATAGCTTCGGACCCTCCACTTCTTAAACAAGCCTACTGGTTAGCTGATAGTGAACTCATGTTACCCACGAAGGAAGATGAACAAGTAGAAACAGAGGATAAAAAAGAAGAGCAAGAGGTGGAAGAAGAGAAGAGGGCTGTGAGGAAGAAGGAGAGTTTTGAGAGCTTAGTCTCAGAGTGTGAAGAAGGTAACAATGGGCAGAATCAAATGCCAAGAAGGTGCACTCATTGCCTTGCACAGAGGACCCCACAATGGAGGGCAGGGCCATTGGGTCCAAAAACACTATGTAATGCATGTGGAGTGAGGTACAAGTCTGGTAGATTGCTTCCAGAATATAGGCCAGCCAAGAGTCCTACTTTTGTAAGCTACTTGCACTCCAATTCCCACAAAAAGGTCATGGAGATGAGAATGGCTGTTCTGTCTCCTGTTCCTACCAGTGAGGATTAA 846 0.4634 MDVCRNASVSGDCEQEQVLLSSCSKLSTFSTTLDDLFSSHNTEVDVGLEWLSVFVEDCFSSSACCLLAPTDAKNIEANSKSSVQLQRTQQKQSPLQSFAVPGKARSKRKRLSAPRTKNPLSSWSHHLNPQNEPIASDPPLLKQAYWLADSELMLPTKEDEQVETEDKKEEQEVEEEKRAVRKKESFESLVSECEEGNNGQNQMPRRCTHCLAQRTPQWRAGPLGPKTLCNACGVRYKSGRLLPEYRPAKSPTFVSYLHSNSHKKVMEMRMAVLSPVPTSED 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01725 281 MobiDBLite consensus disorder prediction 156 176 - -
Accr5g01725 281 MobiDBLite consensus disorder prediction 87 134 - -
Accr5g01725 281 Pfam GATA zinc finger 207 241 IPR000679 GO:0006355|GO:0043565
Accr5g01725 281 CDD ZnF_GATA 206 253 IPR000679 GO:0006355|GO:0043565
Accr5g01725 281 FunFam GATA transcription factor 197 276 - -
Accr5g01725 281 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 202 265 - -
Accr5g01725 281 ProSitePatterns GATA-type zinc finger domain. 207 232 IPR000679 GO:0006355|GO:0043565
Accr5g01725 281 SMART GATA_3 201 255 IPR000679 GO:0006355|GO:0043565
Accr5g01725 281 Gene3D - 197 268 IPR013088 GO:0006355|GO:0008270
Accr5g01725 281 ProSiteProfiles GATA-type zinc finger domain profile. 201 237 IPR000679 GO:0006355|GO:0043565
Accr5g01725 281 PANTHER GATA TRANSCRIPTION FACTOR 14 273 - -
Accr5g01725 281 MobiDBLite consensus disorder prediction 115 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01725 Accr-Chr5 43599721 43600838 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01725 21 269 C2C2-Gata Transcription Factor Family AT4G32890 38.521 9.83e-42 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Accr5g01725 GATA 1.2e-14 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01725 - - pcin:129284700 387.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02862 2 64503861 64505024 Accr5g01725 5 43599721 43600838 CCT