LGRPv2

Gene search

Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr5g01718	387	ProSiteProfiles	NAC domain profile.	17	168	IPR003441	GO:0003677\|GO:0006355
	Accr5g01718	387	PANTHER	PROTEIN CUP-SHAPED COTYLEDON 2-RELATED	16	270	-	-
	Accr5g01718	387	FunFam	NAC domain-containing protein 100-like	26	172	-	-
	Accr5g01718	387	SUPERFAMILY	NAC domain	15	169	IPR036093	GO:0003677\|GO:0006355
	Accr5g01718	387	Gene3D	NAC domain	26	173	IPR036093	GO:0003677\|GO:0006355
	Accr5g01718	387	Pfam	No apical meristem (NAM) protein	18	143	IPR003441	GO:0003677\|GO:0006355

Showing 1 to 6 of 6 entries

Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr5g01718	Accr-Chr5	43537314	43538843	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr5g01718	1	214	NAC Transcription Factor Family	AT5G18270	70.982	1.58e-112	330

Showing 1 to 1 of 1 entries

Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	NAC	Accr5g01718		NAM	2.8e-39	No_clan

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr5g01718	-		-	aprc:113861501	424.091

Showing 1 to 1 of 1 entries