Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01683 ATGAACCCATTTTCATCGTCGTCATCCAAGGCCAAAAAGAAGCAAACGGCGACAACAAGCACAGCCGCAGCAATGGCAGCAACAACACAAGAGCAAAAACATGAAACGGCATGGGGAGGGAGGTACCTGGGTGTTCGGAGGAGGCCGTGGGGACGATACGCGGCGGAGATCCGAGACCCATCCACTAAAGAGAGGCATTGGCTCGGCACCTTCGACACTGCTGAAGAAGCCGCGTTGGCCTATGACAGGGCAGCTCGTTCCATGCGCGGCTCACGTGCCCGAACCAACTTCGTCTACTCCGATACACCCCCGGGTTCTTCTGTCACCTCCATTATCTCCCCCGACGAACAGTCCCACCAGAATCACGACTTCTCGTCTTTCTTCGCCCAAAATTCACTCACCCAACAATCTTACCCAAATCCCCAACTCTCCGAATGCAATCTCTCCGACAGGTTCATAGCGTTTACGGATAGTAATGCTTGGTCTTCACCTTCATCTGGGGCTTATAATTATCCACAACATCAAGTTGCAGCGACGGAGGGCCATAACCCTACACATTTCCAACAATTGTATGATGATAGCAACACGGAGCTTCCTCCATTGCCGCCAGATATTACCAGCTCCGCGGGATACGAAATGGGAAACGGGTTTTCCGGTAACGAATTCGGGTATTCGGAGCAGAGCACCGTGACGGATACGAGCGGGGGATCGTACGCGTACATGGGCTTTGATTCGGCTGATTACGTGCATAGCCCGCTGTTCAGCACAATGCCACCGGTGTCAGATAAGGAGCCGGAGGGCTTTGATCTGGGGAATTCGTCTTATTTCTTCTGA 834 0.5288 MNPFSSSSSKAKKKQTATTSTAAAMAATTQEQKHETAWGGRYLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAALAYDRAARSMRGSRARTNFVYSDTPPGSSVTSIISPDEQSHQNHDFSSFFAQNSLTQQSYPNPQLSECNLSDRFIAFTDSNAWSSPSSGAYNYPQHQVAATEGHNPTHFQQLYDDSNTELPPLPPDITSSAGYEMGNGFSGNEFGYSEQSTVTDTSGGSYAYMGFDSADYVHSPLFSTMPPVSDKEPEGFDLGNSSYFF 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01683 277 Pfam AP2 domain 42 90 IPR001471 GO:0003700|GO:0006355
Accr5g01683 277 Gene3D AP2/ERF domain 40 99 IPR036955 GO:0003700|GO:0006355
Accr5g01683 277 MobiDBLite consensus disorder prediction 1 36 - -
Accr5g01683 277 PRINTS Ethylene responsive element binding protein signature 64 80 IPR001471 GO:0003700|GO:0006355
Accr5g01683 277 PRINTS Ethylene responsive element binding protein signature 42 53 IPR001471 GO:0003700|GO:0006355
Accr5g01683 277 CDD AP2 41 97 IPR001471 GO:0003700|GO:0006355
Accr5g01683 277 ProSiteProfiles AP2/ERF domain profile. 41 98 IPR001471 GO:0003700|GO:0006355
Accr5g01683 277 FunFam Ethylene-responsive transcription factor 2 41 99 - -
Accr5g01683 277 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 17 173 - -
Accr5g01683 277 SMART rav1_2 41 104 IPR001471 GO:0003700|GO:0006355
Accr5g01683 277 MobiDBLite consensus disorder prediction 96 122 - -
Accr5g01683 277 SUPERFAMILY DNA-binding domain 41 99 IPR016177 GO:0003677
Accr5g01683 277 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01683 Accr-Chr5 43189152 43189985 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01683 31 269 AP2-EREBP Transcription Factor Family AT5G13910 45.382 4.39e-57 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr5g01683 AP2 1.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01683 K09286 - qsa:O6P43_009772 297.36