Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01682 ATGATGAACCCATTTTCATCGTCGTCATCCAAGGCCAAAAAGAAGCAAACGGCGACAACAAGCACAGCCGCAGCAATGGCAGCAACAACACAAGAGCAAAAACATGAAACGGCATGGGGAGGGAGGTACCTGGGTGTTCGGAGGAGGCCGTGGGGACGATACGCGGCGGAGATCCGAGACCCATCCACTAAAGAGAGGCATTGGCTCGGCACCTTCGACACTGCTGAAGAAGCCGCGTTGGCCTATGACAGGGCAGCTCGTTCCATGCGCGGCTCACGTGCCCGAACCAACTTCGTCTACTCCGATACACCCCCGGGTTCTTCTGTCACCTCCATTATCTCCCCCGACGAACAGTCCCACCAGAATCACGACTTCTCGTCTTTCTTCGCCCAAAATTCACTCACCCAACAATCTTACCCAAATCCCCAACTCTCCGAATGCAATCTCTCCGACAGGTTCATAGCGTTTACGGATAGTAATGCTTGGTCTTCACCTTCATCTGGGGCTTATAATTATCCACAACATCAAGTTGCAGCGACGGAGGGCCATAACCCTACACATTTCCAACAATTGTATGATGATAGCAACACGGAGCTTCCTCCATTGCCGCCAGATATTACCAGCTCCGCGGGATACGAAATGGGAAACGGGTTTTCCGGTAACGAATTCGGGTATTCGGAGCAGAGCACCGTGACGGATACGAGCGGGGGATCGTACGCGTACATGGGCTTTGATTCGGCTGATTACGTGCATAGCCCGCTGTTCAGCACAATGCCACCGGTGTCAGATAAGGAGCCGGAGGGCTTTGATCTGGGGAATTCGTCTTATTTCTTCTGA 837 0.5281 MMNPFSSSSSKAKKKQTATTSTAAAMAATTQEQKHETAWGGRYLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAALAYDRAARSMRGSRARTNFVYSDTPPGSSVTSIISPDEQSHQNHDFSSFFAQNSLTQQSYPNPQLSECNLSDRFIAFTDSNAWSSPSSGAYNYPQHQVAATEGHNPTHFQQLYDDSNTELPPLPPDITSSAGYEMGNGFSGNEFGYSEQSTVTDTSGGSYAYMGFDSADYVHSPLFSTMPPVSDKEPEGFDLGNSSYFF 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01682 278 PRINTS Ethylene responsive element binding protein signature 43 54 IPR001471 GO:0003700|GO:0006355
Accr5g01682 278 PRINTS Ethylene responsive element binding protein signature 65 81 IPR001471 GO:0003700|GO:0006355
Accr5g01682 278 ProSiteProfiles AP2/ERF domain profile. 42 99 IPR001471 GO:0003700|GO:0006355
Accr5g01682 278 MobiDBLite consensus disorder prediction 1 36 - -
Accr5g01682 278 SUPERFAMILY DNA-binding domain 42 100 IPR016177 GO:0003677
Accr5g01682 278 FunFam Ethylene-responsive transcription factor 2 42 100 - -
Accr5g01682 278 Pfam AP2 domain 43 91 IPR001471 GO:0003700|GO:0006355
Accr5g01682 278 Gene3D AP2/ERF domain 41 100 IPR036955 GO:0003700|GO:0006355
Accr5g01682 278 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 18 174 - -
Accr5g01682 278 CDD AP2 42 98 IPR001471 GO:0003700|GO:0006355
Accr5g01682 278 SMART rav1_2 42 105 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01682 Accr-Chr5 43189149 43189985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01682 32 270 AP2-EREBP Transcription Factor Family AT5G13910 45.382 5.51e-57 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr5g01682 AP2 1.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01682 K09286 - qsa:O6P43_009772 297.36