Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01675 ATGTCAAGGAATCTTGCAGCAACAGTAGGAGGAGCTGCAGGAGCCGTGGCACTGGTAGGGATAGTTATACTACTCATATGGTTTTGCCTATTTCACAAGAGTGGTGTTTCTAGAAACTCAGAGACAGGGTCCTCTGATCATTCACAAGTGGGAAGACCTGGTGGGATAGAGCTAACAGTAAGAGATGCTAGGCGTTTTGAGATTGAAGAACTGTCTCAGGCTACAAAAAATTTCAGTGACAAAAATTTGATTGGAGAAGGCAAATTTGGAGAAGTTTACAGGGGTTTACTTCATGAGGGAATGCTTGTAGCCATCAAAAAGCGCCATGGATCCCCCAGTCAGGAATTTGTAGATGAGGCACAATTCCTCTCATCCATTCGAGATCGAAATCTTGTAACTCTCCTGGGATATTGCCAGGAAAACAATCTACAGTTTCTCATATATGAATACGTGCCTAATGGGAGCGTCTCCAGTCACTTGTATGGAGCTGCTCGTCAATCACGTGAGAAGCTGGACTTCAAGCATAGGCTTTCAATAGCTCTAGGTGCAGCTAAAGGTTTAGCTCATCTTCACTCCTTGAGCCCTCGTTTGGTGCATAGGGATTTCAAAACAGCCAATGTTCTCGTGGATGAAAACTTCATCCCTAGGGTCGCCGATGCAGGGCTTCGAAACTTCCTTGGAAGAGTTGAAATTGCAGGGCCATCTTCTCAAGTTGCGGCACATGAAATCTTCCTTGCTCCTGAAGTGAGAGAATTCAAAAGATATTCTGAAAAGAGTGATGTGTACAGCTTTGGGGTATTTTTGCTGGAACTGTTAAGCGGGAGGGAAGCAACTGAATCACCATCTTCAGACTCAAATCAGAATCTAGTTGAATGGGTGCAAAGTAAGCGAGAGCATGGGATTTTAGCAAACATAGTTGATGAAAAAATGGGAAGCAATTATACAGCAGAAGGCATGGAAGAGTTTATGTCACTGATAGTCCCATGTATTGATACTTCAAGTGAGAGACGACCTGCAATGAGCTATGTGGTGATGGAAATGGATCGAATACTTGAGAAAGAAAGAAACTTGACGACAGTGATGGGAGAAGGAACCCCAACTGTGACCCTTGGAAGCCAATTATTTAAAGCAGCAAAATAA 1140 0.4351 MSRNLAATVGGAAGAVALVGIVILLIWFCLFHKSGVSRNSETGSSDHSQVGRPGGIELTVRDARRFEIEELSQATKNFSDKNLIGEGKFGEVYRGLLHEGMLVAIKKRHGSPSQEFVDEAQFLSSIRDRNLVTLLGYCQENNLQFLIYEYVPNGSVSSHLYGAARQSREKLDFKHRLSIALGAAKGLAHLHSLSPRLVHRDFKTANVLVDENFIPRVADAGLRNFLGRVEIAGPSSQVAAHEIFLAPEVREFKRYSEKSDVYSFGVFLLELLSGREATESPSSDSNQNLVEWVQSKREHGILANIVDEKMGSNYTAEGMEEFMSLIVPCIDTSSERRPAMSYVVMEMDRILEKERNLTTVMGEGTPTVTLGSQLFKAAK 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01675 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Accr5g01675 379 ProSiteProfiles Protein kinase domain profile. 78 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g01675 379 SUPERFAMILY Protein kinase-like (PK-like) 64 345 IPR011009 -
Accr5g01675 379 Gene3D Transferase(Phosphotransferase) domain 1 151 365 - -
Accr5g01675 379 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 14 354 IPR047117 -
Accr5g01675 379 FunFam Protein kinase superfamily protein 151 364 - -
Accr5g01675 379 Gene3D Phosphorylase Kinase; domain 1 53 150 - -
Accr5g01675 379 Pfam Protein tyrosine and serine/threonine kinase 82 346 IPR001245 GO:0004672|GO:0006468
Accr5g01675 379 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Accr5g01675 379 FunFam Protein kinase superfamily protein 43 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01675 Accr-Chr5 43073516 43076005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01675 4 373 Receptor kinase-like Gene Family AT3G46290 34.837 1.12e-61 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Accr5g01675 PK_Tyr_Ser-Thr 1.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01675 - - tcc:18601148 562.377