Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01672 ATGTCTCACTCCCAAACACATCCCTACCTTATCGACTCCACTACTACTTCCACCTTCCCAATCCCACAAGTAACTACTACCTCTTCTCCTGCTTTGATTGACACTCAGATCATCCACAATTTACCTCAAGGGAATATAATAGAAAGGAAAAAACACTATAGAGGAGTTAGGCAGAGACCGTGGGGGAAATGGGCAGCCGAAATCCGAGACCCAAACAAAGCAGCAAGAGTGTGGCTTGGCACTTTTGATACGGCAGAGGATGCTGCTGCTGCTTATGATGCTGCTGCTTTGAAGTTCAAAGGCAATAAAGCCAAGCTCAATTTCCCTGAACGTGTAGCCAATTTTCAAACTTCATCATTCGCTCCGCCTCCTCGGCCTCCGTCTGATGTGGTGGCGCCGCTTCCGGAATCTCAAACACCATGGCCGCCTCCTCCATCAAGCGAGGGGTTTCCAAACCTAATGCAGTATGCTGAGGTGCTTCGTAGTAGGGATGATGATGATCTGCAACGAGCTGCTTCGGGACTTTATAATTATCATCAGAGTGTTAACGAGTCATCATTTCTGTATGATTCTTCTTCATTCTTCTCATCTTCGTCGTTGTCAGCAGTGACTTCGTCTTCTTCCACGGCTGGGTCTGATCAACAAATAATGGGAGATAGTCGTGGCTTTTCGGGTTCTTATTATCTTTTCGATAAGGGGACTGATGATTTTGATGGAAGCCACACGAGGTGA 732 0.4672 MSHSQTHPYLIDSTTTSTFPIPQVTTTSSPALIDTQIIHNLPQGNIIERKKHYRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEDAAAAYDAAALKFKGNKAKLNFPERVANFQTSSFAPPPRPPSDVVAPLPESQTPWPPPPSSEGFPNLMQYAEVLRSRDDDDLQRAASGLYNYHQSVNESSFLYDSSSFFSSSSLSAVTSSSSTAGSDQQIMGDSRGFSGSYYLFDKGTDDFDGSHTR 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01672 243 FunFam Ethylene-responsive transcription factor 2 51 110 - -
Accr5g01672 243 SUPERFAMILY DNA-binding domain 52 110 IPR016177 GO:0003677
Accr5g01672 243 SMART rav1_2 52 115 IPR001471 GO:0003700|GO:0006355
Accr5g01672 243 ProSiteProfiles AP2/ERF domain profile. 52 109 IPR001471 GO:0003700|GO:0006355
Accr5g01672 243 Gene3D AP2/ERF domain 51 112 IPR036955 GO:0003700|GO:0006355
Accr5g01672 243 MobiDBLite consensus disorder prediction 116 149 - -
Accr5g01672 243 CDD AP2 51 110 IPR001471 GO:0003700|GO:0006355
Accr5g01672 243 PANTHER DNA-BINDING DOMAIN 48 191 IPR044808 GO:0003700|GO:0009873
Accr5g01672 243 MobiDBLite consensus disorder prediction 120 149 - -
Accr5g01672 243 PRINTS Ethylene responsive element binding protein signature 75 91 IPR001471 GO:0003700|GO:0006355
Accr5g01672 243 PRINTS Ethylene responsive element binding protein signature 53 64 IPR001471 GO:0003700|GO:0006355
Accr5g01672 243 Pfam AP2 domain 52 101 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01672 Accr-Chr5 43012397 43013761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01672 49 176 AP2-EREBP Transcription Factor Family AT5G13330 53.676 8.11e-38 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr5g01672 AP2 1.8e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01672 - - pcin:129305564 203.371