Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01670 ATGGGGGCGCAACCGTTGAACCGTGTTGGTCCGAATGAGAGTCCTAATGCTAACGCTGAGCTGGGTGCTGAAATGGGTCGTCGTCATTCCGTGGTTTCGACCCCCAAGCGTAATGTTGTATCGAATGGTCATATATGTGACAAGAGTGAAGAACGAAATGGTTCAAAAAATTCACCAATTCAGAGAAGAACCAGTCCTCGAATACAGGCCAAGCAAAAAGTGGATACGGAACTTCCAGTGCGCTGCGGAGATGAGTTGCACAATGAATCTAGTGATGCGAAGATGAGTACCTGTAAAACAAGTGTTAACTACGAAAATGTAGATAAGCAACAGGTAGTTGGAGGGAGAACTAAAAATTTGGATAATTCAACAACTAAGGAACCACAAGAGCCGAAGGAGTCTTTAATACAGAGAAGAACTAGTCCTCGAATCCAAGCCAGGCAAAAGGTGGATAAGGCACTTCCAGTGTCCAGGAGGGGTCAGCTGTCTGCCAGCGATATGAAGAAGAATACAACCTGCAAAAGAAGTCGCAATGACGAAAATGGCTGTAAGGAAAATACTGTGGAGGACCAACAGAAAGCTAAGAAATTGAACGAGTCAATTACTGAAGAGCCTAGTGAGGACAATGAATCGTCAGTTCAAAGGATAGATAACTCTCGAGTTCAAAGTAAGGAATTACTAGTGCGACGTAGAGTAGAGTTACTAGAGGATCGAGATAACACTGGTACTGATAAGAAAAGTAAGTGTTTCAAAAGAAGTTGCTATGATGAAAATGGGGGTAAGGAAGGGGGAGTAGGCAGTTCACCTAGAGTAAAGAAGCTGAAAGAGGCTACCTTGGTCCATAACAAACGAACATCTGGGGGGTCGAAAGCTAATGGGGCAGGGACTTTGGCGGATAAAAGCGACTCCGTCAAGGTGAAAGAAACGCTGAGGTTGTTTAACAAGCATTATCTTCATTTCGTCCAGGAGGAGGAAAAGAGGTGTAACAAAGTGGGATCTTCCCTCAAAGTGTCTAAAGGAGGCTCAAAATCTAAGGAGGAGGAGAAGACGCGTAACAAAGTGAAATCTTCCCCTAAAGTGTCTAAAAAGGGTTCAAAATCTAAGAAAAATGCAGCAGTTGATGTTGAAAAGTCAATGACTAAACGACCTGATTTGAAAGCATTATCCAAGATGTTGGAAAATAAGGAGATATTGTATCCTGAGAAAAGAATTGGTGATATTCCAGGTATTACGGTTGGACATCAATTCTATTCACGCGCTGAAATGGCTGCTGTTGGGTTTCATAGCCACTGGCTAAATGGCATAGATTATATGGGTCAAGCTTATTCCAAAGTGTCACAGTACAGTCACTATAAATTTCCACTTGCTGTGGCCATTGTTTTGTCGGGTATGTATGAGGATGATGTTGATAATGCTGAGGAAGTTGTATATACTGGTCAAGGTGGGCAGAATTTGACTGGTGATAAGCGTCAAATTGGCGATCAGAAGTTAGTGCGGGGTAATTTGGCTTTGAAGAACTGCATGGAGCAATGTATGTATGTAAGGGTGGTTCGCGGACATGAATCTTCTAGCAGTTACAGTGGCAAAGTATACACATATGATGGATTGTATAAGGTTGTTAATTATTGGGCAGAAAAAGGATTTTCTGGGTTTACGGTCTACAAGTTTCGGCTGAAAAGGCTTGATGGGCAGCCAATATTGACAACTAACCAGGTGTATTTCACTAATGGACGTGCCCCTCAGTCCATTGCTGAAATACGAGGGCTTGTAATTGAAGACATCTCCAATGGTGAAGAAGAGGTGCCTATTCCTGCAACTAACCTGATTGATGACCCCCCAGTTGCACCCACAGGTTTTAAATATAAAAAATCAATTTTGCTTTCAAAGAACGTAAAGCTCCCCAAAGCTGTCACTGGATGCAATTGCAAAGGCTCATGTGTGGATCCTACATCCTGTGAATGTGCTTTACGAAATGGATCTGATTTCCCCTATGTATCTCGTAATGGAGGGAGGTTAATTGAAGCCAAGGATGTTGTCTTTGAATGTGGGCCAAAATGTGGATGTGGTCCTGGTTGCGTTAATCGAACTTCTCAAAGAGGACCGAGATATCGTCTTGAGGTTTTTCGTACTGCGAAGAAAGGATGGGCTGTTAGATCTTGGGATCACATACCTTCTGGAGCACCAGTTTGTGAATACACAGGATTACTCAGGAGGACAGAAGATGTAGAGAATACACTCGAGAACAACTATATTTTTGAGATAGATTGTTTGCAAACGATGAAGGGCATTGGTGGAAGAGAGAGGCGATCACAAAAGGAAACATCTGCAGCAGTCAAGCTCTTGGACAATTATGCAGATGATGATTCTGAATCCATACCTGAGTTTTGTATTGATGCTGGATCAACTGGAAATATTGCTCGATTCATAAACCATAGTTGTGAACCTAATTTATTTGTCCAATGTGTTTTGAGCTCACACCATGATTTAAGGCTGGCACGAGTGATGCTATTTGCTGCAGACAACATACCACCCTTACAGGAGCTTACATATGACTATGGTTATGCCCTTAATAGTGTCTTGGGTCCTGATGGGAAACTGAAGAAAATGGCGTGTTATTGCGGAGCTGCTGACTGCAGGAAGCGACTATTCTAA 2652 0.4265 MGAQPLNRVGPNESPNANAELGAEMGRRHSVVSTPKRNVVSNGHICDKSEERNGSKNSPIQRRTSPRIQAKQKVDTELPVRCGDELHNESSDAKMSTCKTSVNYENVDKQQVVGGRTKNLDNSTTKEPQEPKESLIQRRTSPRIQARQKVDKALPVSRRGQLSASDMKKNTTCKRSRNDENGCKENTVEDQQKAKKLNESITEEPSEDNESSVQRIDNSRVQSKELLVRRRVELLEDRDNTGTDKKSKCFKRSCYDENGGKEGGVGSSPRVKKLKEATLVHNKRTSGGSKANGAGTLADKSDSVKVKETLRLFNKHYLHFVQEEEKRCNKVGSSLKVSKGGSKSKEEEKTRNKVKSSPKVSKKGSKSKKNAAVDVEKSMTKRPDLKALSKMLENKEILYPEKRIGDIPGITVGHQFYSRAEMAAVGFHSHWLNGIDYMGQAYSKVSQYSHYKFPLAVAIVLSGMYEDDVDNAEEVVYTGQGGQNLTGDKRQIGDQKLVRGNLALKNCMEQCMYVRVVRGHESSSSYSGKVYTYDGLYKVVNYWAEKGFSGFTVYKFRLKRLDGQPILTTNQVYFTNGRAPQSIAEIRGLVIEDISNGEEEVPIPATNLIDDPPVAPTGFKYKKSILLSKNVKLPKAVTGCNCKGSCVDPTSCECALRNGSDFPYVSRNGGRLIEAKDVVFECGPKCGCGPGCVNRTSQRGPRYRLEVFRTAKKGWAVRSWDHIPSGAPVCEYTGLLRRTEDVENTLENNYIFEIDCLQTMKGIGGRERRSQKETSAAVKLLDNYADDDSESIPEFCIDAGSTGNIARFINHSCEPNLFVQCVLSSHHDLRLARVMLFAADNIPPLQELTYDYGYALNSVLGPDGKLKKMACYCGAADCRKRLF 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01670 883 ProSiteProfiles Pre-SET domain profile. 638 700 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Accr5g01670 883 Pfam SET domain 714 853 IPR001214 GO:0005515
Accr5g01670 883 ProSiteProfiles SET domain profile. 703 853 IPR001214 GO:0005515
Accr5g01670 883 SMART set_7 703 859 IPR001214 GO:0005515
Accr5g01670 883 SMART preset_2 591 687 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Accr5g01670 883 SUPERFAMILY PUA domain-like 387 580 IPR015947 -
Accr5g01670 883 MobiDBLite consensus disorder prediction 77 92 - -
Accr5g01670 883 SMART G9a_1 400 564 IPR003105 -
Accr5g01670 883 MobiDBLite consensus disorder prediction 43 57 - -
Accr5g01670 883 MobiDBLite consensus disorder prediction 123 137 - -
Accr5g01670 883 MobiDBLite consensus disorder prediction 93 122 - -
Accr5g01670 883 ProSiteProfiles Post-SET domain profile. 867 883 IPR003616 -
Accr5g01670 883 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 122 876 - -
Accr5g01670 883 Pfam SAD/SRA domain 404 564 IPR003105 -
Accr5g01670 883 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 76 883 IPR025794 GO:0016571
Accr5g01670 883 MobiDBLite consensus disorder prediction 170 214 - -
Accr5g01670 883 MobiDBLite consensus disorder prediction 259 301 - -
Accr5g01670 883 MobiDBLite consensus disorder prediction 1 223 - -
Accr5g01670 883 MobiDBLite consensus disorder prediction 331 378 - -
Accr5g01670 883 Pfam Pre-SET motif 594 695 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Accr5g01670 883 Gene3D - 388 577 IPR036987 -
Accr5g01670 883 ProSiteProfiles YDG domain profile. 405 560 IPR003105 -
Accr5g01670 883 MobiDBLite consensus disorder prediction 340 355 - -
Accr5g01670 883 SUPERFAMILY SET domain 588 860 IPR046341 -
Accr5g01670 883 Gene3D SET domain 584 883 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01670 Accr-Chr5 42972101 42986433 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01670 391 883 EF-hand Containing Proteins AT5G13960 67.475 0.0 707
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Accr5g01670 SAD_SRA 8.5e-49 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01670 K11420 - qsa:O6P43_006101 940.643