Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01667 ATGTCCATCTTGCCCTCACAAGCTCAGGCATCAACCTCGTCGTCATCTCAATCTCCGATATCTCCAAACCCTAATTCCCAATATGGAAACCCCTTTCTCCCATCTCATTCTCCTCCATCCGTGTCCTCCTCTCCCCTTCAAGTTCCATCCTTCGGATCTCTCCGGATCTCCGATTCACCATCTCCCGTCGCTATGCCCGACGTCAATTCAGGTCCATCAATTCCAGCTACAGAAGATTCTGGTGGACCTTCCAAAAAGGTGACTGAGTTGGGATCTCCTAATGGTACGAATATTTCATCTCATCAAAACCCCAGAGTGCATTCCCATAGTCAGTCAAGAAGAAGGGCTACTAGATCATCCCAGTCAGCAGGGAAGATGACAGGAACAGTTTCATCTCCTGGAGATCAGCAGAATAATAGGTCCTTCAATCCTCATGGGAACGCCCCTTTGTCAGGAAGAAAATCCCAGATGGTTAATGGTAATCACTTGCTGAACTTTCATTATGATCCCATATCTCGTCCAACAAGGGGTCCTCCTCCTCCGCCACCAAGAAGGCAGCAGAAGAAAAAGCCATACAACAAGGATTTATTTTTACAAGCAAATTACAAATTTGTGGTGTTAGATTCAGGAGACTATTCACCAGAGTCTTTGGACCCAGATAAAATGCTACAGTGGGAAGATATTGTGTGTGTGAGATATTCCACTCCATTCTTGGTTCAGTGTCCAATTTGTTTGGAGTATCCACTTTGTCCGCAAATAACCTCTTGTGGACATATTTTTTGTTTCCCTTGTATCTTACAATATTTGATGATGGGCGAAGAGGATCATAAAGGTGATTGCTGGAAAAGGTGTCCCCTATGTTTTGTCATGATATCTGCAAAGGATTTATATACCATCTACATTGAAAATGTTGAGCAGTATCAAGTGGGAGATATCATTGAGTTCAGACTTTTAACTCGGAAAAAGGACACTTTTACTCTGTCTGATAAAAATAAGGAGATGGATGTCTTATTATGTGGTGATAATAATTTATGTGACCCATTTTCTAAGTTCACACTCACATCAGATGTAGATCTGTCAGTGAGACAGGCAATATTGGATCTAGATGGTTGGCTAGCTAAAGCTGATTCTGGTCTTGTTGATGACTTGGAGAAACTTCCATATGTTTGTGCTGCGATGCAACAATTAGAACAGAGGAAGAAGTATTGGAATGAGCACAGGGCTTGTGATGTTGGAAAATCCTCTAGGCCTATTGGTTGTGGACATCACAAACCATCAACAGTTGTAAATGGCACTGATGTTGATGATGAAACCCGGTCTTCTGTATCAGGATCTTCCTCTACAGATTTCCATGACCCAAGCAAGGGTATAATAATGGATAATTCAAATCCAAGAGTTTGTCCAGATCAAACTGTGGATTTGGAGAGGAAAGTATTAGATCAAGATTTTAATCTATCTTCTTCCTATGAGGAGAAATATGATATTCAAAGGCATCCGAATGGTTTTGGAGATTCAAAGGAGAGTGACTCATATAATTTTTATCAGGCTGCTGATGGTCAGCATCTCATTCTTCATCCCCTGAACATGAAGTGTCTTCTTCACCATTATGGAAGCTATGATATGCTTCCGCACAGGATAAGTGGTAGGATTCTGCAATTGGAGACAGTCACTCAGTCAGATGCAATGAGGAGGCGGTACCGATATTTGAGTCATTTTCCTTTGACAACAACATTTCAGCTTTGTGAAATTGATTTGACTGAGATGTTGCCCTCTGAATCCCTGGCCCCATTCATGGACGAATTGAAGAAGCGTGCAAACCAGAGGAGGCAACTTGCAAAGAAGGAACAAAAAGAGAAAGTCAAGGCTGAAGCTGCTTCTACGCATTCTATTCCCATACCAACCAGTTCTCAGCTGATGTCTCGTGACAATTCTCCGCCATTCTCCATGGATGATTTTGAAGCTTTGGGGAATTCGGCCGTATCTTCCAGTCCTCCTGTTGTTGGGGGAAGAAGTTTGTTTTCAAGTGTCACAAGACTTGGTTTTGCTGCTGGTCATGATTCTCCATCCTTGAACATGCAAGAAACTAATGGCAATCATAATATGACAACTGATTCGTCTGGCTTGACGGGTCCGAGAAATGTGGAGACATCGTCATTTGCCAATGTTATATCTAGAGCAGAGTCTATTAATAGCTTAAATGCACCCAAGACAAATGACTTGGGTAAGAAGGGGAAGAAGGCAAGTAGAGTTCTTCTGTCAACAGCTGGGGGCAGGCGTTACTGA 2283 0.4249 MSILPSQAQASTSSSSQSPISPNPNSQYGNPFLPSHSPPSVSSSPLQVPSFGSLRISDSPSPVAMPDVNSGPSIPATEDSGGPSKKVTELGSPNGTNISSHQNPRVHSHSQSRRRATRSSQSAGKMTGTVSSPGDQQNNRSFNPHGNAPLSGRKSQMVNGNHLLNFHYDPISRPTRGPPPPPPRRQQKKKPYNKDLFLQANYKFVVLDSGDYSPESLDPDKMLQWEDIVCVRYSTPFLVQCPICLEYPLCPQITSCGHIFCFPCILQYLMMGEEDHKGDCWKRCPLCFVMISAKDLYTIYIENVEQYQVGDIIEFRLLTRKKDTFTLSDKNKEMDVLLCGDNNLCDPFSKFTLTSDVDLSVRQAILDLDGWLAKADSGLVDDLEKLPYVCAAMQQLEQRKKYWNEHRACDVGKSSRPIGCGHHKPSTVVNGTDVDDETRSSVSGSSSTDFHDPSKGIIMDNSNPRVCPDQTVDLERKVLDQDFNLSSSYEEKYDIQRHPNGFGDSKESDSYNFYQAADGQHLILHPLNMKCLLHHYGSYDMLPHRISGRILQLETVTQSDAMRRRYRYLSHFPLTTTFQLCEIDLTEMLPSESLAPFMDELKKRANQRRQLAKKEQKEKVKAEAASTHSIPIPTSSQLMSRDNSPPFSMDDFEALGNSAVSSSPPVVGGRSLFSSVTRLGFAAGHDSPSLNMQETNGNHNMTTDSSGLTGPRNVETSSFANVISRAESINSLNAPKTNDLGKKGKKASRVLLSTAGGRRY 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01667 760 Pfam Zinc finger, C3HC4 type (RING finger) 241 287 IPR018957 GO:0046872
Accr5g01667 760 MobiDBLite consensus disorder prediction 431 452 - -
Accr5g01667 760 ProSitePatterns Zinc finger RING-type signature. 256 265 IPR017907 -
Accr5g01667 760 SMART ring_2 241 287 IPR001841 -
Accr5g01667 760 MobiDBLite consensus disorder prediction 1 192 - -
Accr5g01667 760 FunFam RING finger protein 10 234 302 - -
Accr5g01667 760 CDD RING-HC_RNF10 239 296 - -
Accr5g01667 760 MobiDBLite consensus disorder prediction 115 162 - -
Accr5g01667 760 SUPERFAMILY RING/U-box 240 293 - -
Accr5g01667 760 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 235 302 IPR013083 -
Accr5g01667 760 PANTHER RING FINGER 10 FAMILY MEMBER 78 760 IPR039739 -
Accr5g01667 760 MobiDBLite consensus disorder prediction 420 463 - -
Accr5g01667 760 MobiDBLite consensus disorder prediction 87 106 - -
Accr5g01667 760 Coils Coil 598 618 - -
Accr5g01667 760 ProSiteProfiles Zinc finger RING-type profile. 241 287 IPR001841 -
Accr5g01667 760 MobiDBLite consensus disorder prediction 607 624 - -
Accr5g01667 760 MobiDBLite consensus disorder prediction 1 57 - -
Accr5g01667 760 MobiDBLite consensus disorder prediction 607 627 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01667 72 696 C3H Transcription Factor Family AT3G26730 53.343 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01667 K26979 - gmx:100798764 970.304