Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01651 ATGATGATGGATCAGGGAAAGAAGCTGCTTCTTCGCAAAAACGAGGCCTCTGATTTCGTGGCAGGTGTTGACGCTGAGCTTGGCCTTGTCACCGTGCCACCAGACATCCACAACATTACTCCTCCCGGGTCGGATCCTCCTTCTCCGATCCGAGACCTCGGCCTCGTCGCTGCCTTTCGCACCGTTCATCGGAAGAAACGGATGGTCCGCCAGAGGAGGTCCTCCGCCGTCTCCATGAATCTTCCTCCGCCACCTCCTCCTCCTTCCTCCTCCTCCTCGCACGTGCCTATCTCCCCGCTTCGATCTTACAATCCTCTTCCACCCCCACGTGAGATTGATCACCAGAGGTTGAGATTTCTTTTCCAAAAGGAGCTCAAGAACAGTGACGTAAGCTCCCTCCGAAGAATGGTGCTCCCAAAGAAAGCAGCAGAGGCTTTCCTTCCTATCCTGGAGTCTAAAGAAGGAATTGTTATAAGCATGGATGACATAGATGGTCTTCATGTCTGGAGCTTCAAGTACAGGTTTTGGCCTAATAACAACAGTCGGATGTATGTACTTGAAAACACTGGGGAATTTGTTAGCACACATGGCTTACGACTTGGAGATTCCATAGTGGTTTATCAGGATAATCAAACCCTTAATTATGTGATTCAGGCTAAAAAGGCTTCTGAGCAAGATGATTTTATGGCTATATCTAGTGACAACATCAATGATCTCTTTCTGCAAGACTATGAGGTTAACAAGTCAAATGGTTTGAGTGTGATGACCTATCCCACAATGAATATTGACACAGACATGTCATTCATATATGACACTACATTCTCAAATGATTCTCCATTTGACTTTTTGGGTGGATCGATGACCAGTTTCTCAAGAATTGGATCCGTCGAAACTTTTGGCTCTGTCGAGAATTTGTCACTCGATGACTTCTATTAA 936 0.4637 MMMDQGKKLLLRKNEASDFVAGVDAELGLVTVPPDIHNITPPGSDPPSPIRDLGLVAAFRTVHRKKRMVRQRRSSAVSMNLPPPPPPPSSSSSHVPISPLRSYNPLPPPREIDHQRLRFLFQKELKNSDVSSLRRMVLPKKAAEAFLPILESKEGIVISMDDIDGLHVWSFKYRFWPNNNSRMYVLENTGEFVSTHGLRLGDSIVVYQDNQTLNYVIQAKKASEQDDFMAISSDNINDLFLQDYEVNKSNGLSVMTYPTMNIDTDMSFIYDTTFSNDSPFDFLGGSMTSFSRIGSVETFGSVENLSLDDFY 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01651 311 ProSiteProfiles B3 DNA-binding domain profile. 121 223 IPR003340 GO:0003677
Accr5g01651 311 SUPERFAMILY DNA-binding pseudobarrel domain 119 218 IPR015300 -
Accr5g01651 311 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 63 227 IPR044800 GO:0003700
Accr5g01651 311 SMART B3_2 121 223 IPR003340 GO:0003677
Accr5g01651 311 Pfam B3 DNA binding domain 121 219 IPR003340 GO:0003677
Accr5g01651 311 CDD B3_DNA 119 221 IPR003340 GO:0003677
Accr5g01651 311 MobiDBLite consensus disorder prediction 79 93 - -
Accr5g01651 311 Gene3D - 117 236 IPR015300 -
Accr5g01651 311 MobiDBLite consensus disorder prediction 65 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01651 Accr-Chr5 42829082 42832212 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01651 64 311 B3 DNA Binding Superfamily AT3G26790 54.122 1.78e-85 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Accr5g01651 B3 7.6e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01651 K09287 - gmx:100783961 389.037