Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01642 ATGGAGATGCGTCCAAGCCTTGCTTTTAACGGTGGCGTGAAACTGCCTGTTGGTTTCAGGTTCCGTCCCACCGACGAAGAACTCATCGTTCACTATCTCAGAAAGATGGCACTTGGTCTGCCATTACCTGCGCCTCTGATTCCTGTTCTGGATGTGTTTCACATCGATCCTTGGAAGTTCCCAGGTGTGGGTGACGCGGATTCCATGGAAAATGGGTATTTTTTCAGCGAGAAGAATGATATTTTCTATGGAGGCATAATCGTGATCGCTGAAGGCACTGGCTTCTGGAAGCCCGTTGGGGACGAGATACCAATTGTTTGTCCTCGGACCAACCTTGTGATGGGAACTCGGAAAACCCTGGTTTTCTGCAGTGGCGACACGGAAACCCAATGGTTTATGCATGAACTTCGCCTCGCCGGCCCTGCAGTGAATGTTTACCCAGCCAAGATTCTGCCTTGGAAGAAGTGGGCGGTCTATCGCGTTTTTCAGGAGGGGACGGAGGAGGAGGAGGAGGAGGAGAAGCCCAAGGAAAAAAGGTCTAAGAAGAAGAAGAAGTCCAACAAGAACAAAAAAATTCGGAAGCTTGAGGCTGATGAGGGAGTCAAACCCAGTGTCATCGATTTCGGTGCTGATGGCAACAATTCCGGCGAGGCCCCGCCTCCGCCGCCGGCATCTCCGAGTCTCAGTGAAGGCAGTGACATCACCTCATCTAACTAG 717 0.5146 MEMRPSLAFNGGVKLPVGFRFRPTDEELIVHYLRKMALGLPLPAPLIPVLDVFHIDPWKFPGVGDADSMENGYFFSEKNDIFYGGIIVIAEGTGFWKPVGDEIPIVCPRTNLVMGTRKTLVFCSGDTETQWFMHELRLAGPAVNVYPAKILPWKKWAVYRVFQEGTEEEEEEEKPKEKRSKKKKKSNKNKKIRKLEADEGVKPSVIDFGADGNNSGEAPPPPPASPSLSEGSDITSSN 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01642 238 Coils Coil 178 198 - -
Accr5g01642 238 ProSiteProfiles NAC domain profile. 15 164 IPR003441 GO:0003677|GO:0006355
Accr5g01642 238 Gene3D NAC domain 24 169 IPR036093 GO:0003677|GO:0006355
Accr5g01642 238 MobiDBLite consensus disorder prediction 165 238 - -
Accr5g01642 238 PANTHER NAC TRANSCRIPTION FACTOR 56 15 182 - -
Accr5g01642 238 SUPERFAMILY NAC domain 10 164 IPR036093 GO:0003677|GO:0006355
Accr5g01642 238 Pfam No apical meristem (NAM) protein 16 138 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01642 Accr-Chr5 42710114 42711131 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01642 7 162 NAC Transcription Factor Family AT5G13180 39.130 1.52e-30 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr5g01642 NAM 1.1e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01642 - - pcin:129298153 276.559