Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01629 ATGGATCCCAAGGGCTCAAACAAGCCGGATGAGGCACCCAACAACAAGTTCTTGAGTCTCCCACGGCCACAATCCAACATGGGAGAGAACAACAATAAAGGAGCAGCGGAAGTGAGGGATTTCCAGATTTCGATCGCAGAGAAAGAAGAAAACAGCAAGAACAAGCAGTTAGCTCCCAAGAGAGTTTCCAACAAAGATAGACACACCAAGGTGGAAGGCAGAGGAAGAAGAATAAGGATGCCTGCTCTTTGTGCGGCTAGAATCTTTCAGTTGACCAGAGAATTGGGTCACAAATCCGACGGAGAAACCATACAGTGGCTCCTCCAGCAGGCGGAGCCGTCCATATTCGCCGCCACCGGAACGGGGACAATACCGGCATCTGCTTTAGCTGCAGCAGGGGGCTCTGTTTCACAAGAGGGGACCTCGCTATCTGCAGGACTACATCAAAAAATGGATGAATTAGGGGGGTCCAATATAGGACCAGGAAGTAGGACCAGCTGGGCAATGGTTGGGGGAAATTTGGGGAGACCCCATGTGGCCACAGGTCTATGGCCTTCTTCTGTCACTGGATTTGGGTTTCAGTCATCATCATCTTCTGCTCCATCTGCACCGAGTTTAGGGACTGAGAGTTCAAATTACCTTCAAAAAATTGGGTTCCCTGGCTTTGACTTGCCTGCAGCAGCAGCCACTAACATGGGTCCTATGAGTTTTGCCTCAATTTTGGGTGGGACTAGTAACCAGCAGATTCCTGGTTTGGAACTGGGGCTGTCTCAGGATGGTCATATTGGGATTTTGAACCCACAAGCCTTAAGCCAGGTTTACCAGCAGATAGGTCAAGCTAGAGTACACCCACAGCAGCATCATCAGCAGCATCAGAATCCTCCTGCTAAGGATGATTCTCAAGGTTCTGCAGGACGATAG 921 0.4995 MDPKGSNKPDEAPNNKFLSLPRPQSNMGENNNKGAAEVRDFQISIAEKEENSKNKQLAPKRVSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIFAATGTGTIPASALAAAGGSVSQEGTSLSAGLHQKMDELGGSNIGPGSRTSWAMVGGNLGRPHVATGLWPSSVTGFGFQSSSSSAPSAPSLGTESSNYLQKIGFPGFDLPAAAATNMGPMSFASILGGTSNQQIPGLELGLSQDGHIGILNPQALSQVYQQIGQARVHPQQHHQQHQNPPAKDDSQGSAGR 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01629 306 Pfam TCP family transcription factor 63 148 IPR017887 -
Accr5g01629 306 ProSiteProfiles TCP domain profile. 64 118 IPR017887 -
Accr5g01629 306 MobiDBLite consensus disorder prediction 18 32 - -
Accr5g01629 306 MobiDBLite consensus disorder prediction 278 306 - -
Accr5g01629 306 MobiDBLite consensus disorder prediction 42 72 - -
Accr5g01629 306 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 31 285 IPR005333 GO:0003700
Accr5g01629 306 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01629 Accr-Chr5 42513841 42514761 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01629 1 274 TCP Transcription Factor Family AT3G27010 54.949 1.10e-81 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Accr5g01629 TCP 5.6e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01629 - - cave:132180810 424.861