Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01624 ATGGAGTGGTACTCAAGAGAGTCAGTGTGGGATCCACCGAGAGATCAGCTATACGTTGGAGAAGCGTCGGTGGAGAAATCAGTGTCAGTTGCGGAGACAGAGATGTCGAATTCAAAATCAACATCATCAAAGACGAAGAAGCGCGTGTACCAAAAATCGCCGGAGAAGGTGAAGTGCTCGGTGGATGGATGTAACTTTGACCTGGGGACTTTCCGGGAGTATCACCGGCGGCACAGGGTGTGTCAACCTCACTCCAAGACCTCTTGTGTGCTTGTGAAAGGACAGGAACAGAGATTCTGCCAGCAATGCAGCAGATTTCAATCGCTGGATGAGTTTGATGGCTTCAAGCGGAGCTGTAGGAGACGTTTAGAGGGCCATAATAAACGCAGAAGGAAACCTCGTCCTTTACCTCTCGCCTTCTCTGCAGATTACAAAGGACCCAGAATCCTGCAATTTGGAAATCCTACAAGTGATGATCGTTACGTGAGTATGTGGAATGCTCAACCTGGTGGGAGCTGCTATAATCTTTACCCACCAATTCTGCCTAAGATTGAGATTGAGCAACAGAGTTGTGTGGAAGGTCGTGCATTTGCCAATATAGAAAATATGCAGGTGAAAAATGGGAATGAAGGAGAAAGGCGAGGATTAAACATGTATTGGTTTAATGATAATAATAGTAATGAAGCAGTTCCGGCATTAGCAGCAGTACCAGCAGAAGCTGGAATGGGAGACAAGAACCAGAAGATGCCTTCGGATTCTGCTCTCTATCTTCTGTCAGCACTTCAGGCACAGAGTTCCTCAGAGTTTAGCATGATAGAGTCTGGTATAGATTGTCCAGTTCAATCCCAGCCTCCATTTGAAGAAGACGATGGAACCCTAAACTGTTCGAGTTCAATGAGATTGGGAGTGAAACCTAATGAAACAGAGTTTGATCAAAATGGGATGATTCAAATGGAACTCCAGGTGATGGAACACAGTGCAGGACGATCACTGACGTTCCCTTTTTTCTGGGAGTAA 1017 0.4592 MEWYSRESVWDPPRDQLYVGEASVEKSVSVAETEMSNSKSTSSKTKKRVYQKSPEKVKCSVDGCNFDLGTFREYHRRHRVCQPHSKTSCVLVKGQEQRFCQQCSRFQSLDEFDGFKRSCRRRLEGHNKRRRKPRPLPLAFSADYKGPRILQFGNPTSDDRYVSMWNAQPGGSCYNLYPPILPKIEIEQQSCVEGRAFANIENMQVKNGNEGERRGLNMYWFNDNNSNEAVPALAAVPAEAGMGDKNQKMPSDSALYLLSALQAQSSSEFSMIESGIDCPVQSQPPFEEDDGTLNCSSSMRLGVKPNETEFDQNGMIQMELQVMEHSAGRSLTFPFFWE 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01624 338 SUPERFAMILY SBT domain 57 135 IPR036893 GO:0003677|GO:0005634
Accr5g01624 338 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 36 262 IPR044817 GO:0003677
Accr5g01624 338 Pfam SBP domain 59 132 IPR004333 GO:0003677
Accr5g01624 338 Gene3D - 49 120 IPR036893 GO:0003677|GO:0005634
Accr5g01624 338 ProSiteProfiles Zinc finger SBP-type profile. 56 133 IPR004333 GO:0003677
Accr5g01624 338 MobiDBLite consensus disorder prediction 30 49 - -
Accr5g01624 338 MobiDBLite consensus disorder prediction 30 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01624 Accr-Chr5 42441968 42443181 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01624 59 152 SBP-box Gene Family AT5G50670 56.122 1.36e-33 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Accr5g01624 SBP 5.2e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01624 - - pcin:129306573 377.867