Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01535 ATGGCGGTCAATGGTGTTTCGCCTTTATCGGAGGTTCAGAATTCAGTTTCTGCGATAGATTCCAGTCCTTCTTCGACATTTTGGACTACTCGGCCGTCTCAATCTTCTCTAAGAACGTTTAGAAATCTTGGGGTTTCTTTTGCATCCTATTTTACTGGTCAAGGTGATGACTACTCAACGAAGCCCATCAACAATCATAAGAGTTGTGTAATTGATCGGAGGCATTCTTATCTGGACTCCGACAATGTGAAGCACGAAGAGTTACCAAATGCGTCAAAGCTGTATTACAACTATGGTGGAAAATCTGACCGTTTAAGCCTCCCTGAAAATGTTGAAAGTTGTTTCGGGAAGAGAAGCTGTGCCATGGAACCATTTGATATTTCCACCAATTGTGATTCAGGTAGTAGCGTATTCGAATCTGGAGGTTCATCAAGTGGGGCTGATCCAATAATCAAGAGTTACTGTCATTCAGAGATTAGTTTTTGTCCAAGTCCTCAGAGTAGTTTCTACTCTTCCCCTTTCTATACTGAAGCCAAACAAAGTTTTTCTAATACTGAATTCAGTGAGGGTGTTAGTGTCAGTGATATTACTGATACGAGCATCAACAGTACTCCTACTTTAAACAACTATTTGTATAGACCCCACAAGACAAGTGATGTAAGATGGGAAGCAATTCAAGCGATCCGAGAACGTGATTGGCTCTTGGAAATGAGACATTTCAGTGTGTTGAAGACATTGGGACGTGGAGACATAGGAAAAGTTCATCTTGCTGAGTTGACTGGCACAGGAACTTATTTTGCCATGAAAATTATGGATAAAGAAGAGCTAGCAAGGCGCAAGAAGCTTCCGAGGCTTCAGACAGAAAGAGAGATATTGCAGTCTTTGGATCATCCATTTCTGCCCACATTATATGCACACTTTGAGACAGAGAGATTCGCTTGCTTAGTAATGGAGTTCTGCCCTGGTGGGGACCTGCATGCACTCAGGCAAAGACAACCTCGGAAATATTTCTCAGAGGATGCTGCCAGGTTCTATGTGGCAGAGGTGCTACTTGCTTTGGAGTACTTGCACATGATGGGGATTATTTACCGAGACCTTAAACCTGAGAATGTGTTAGTGAGAGAAGATGGTCATATAATGCTGTCAGATTTCGACCTCTCTCTGAGATGCCCTGTGAACCCAACTCTAGTAAGATCACCAAGCCCTTACGTGGACACAAGAAGCTCAAGATACCTCACTCCACCTCTCTGCATTCTTCCCACTTGTGTCATGCAGCCAGATTGCATCCAACCTGCATGTTTCGCTTTCACTCCTCGCAAACGATCTGCAAAGTCCAATAAGTTGAAAACCAGAATTGAAATGCATCGTCGTCATCAACAACGTGTGACCCATCTTCCTGAGCTCATTGCAGAGCCAACAAATGCACGTTCAATGTCCTTTGTGGGCACTCATGAGTACTTAGCTCCAGAGATTATTAAAGGAGAAGGCCATGGTAGTGCTGTGGACTGGTGGACTTTTGGGGTATTCTTATATGAGCTTTTATTTGGTAGAACTCCGTTCAAAGGCTCAGCAACTAGAGCAACTCTGCTGAATGTAATGAGTCAGCCATTGAGTTTCCCAGAATCACCAAGTGTCAGCTTTGCTGCTAGAGACCTGATAAGGGGTTTGCTTGTGAAAGAGCCACTTCATCGTCTTGCTTATAGACGTGGAGCTGCTGAGATCAAACAACATCCATTCTTTCGCAATGTTGACTGGGCACTCATTCGCTGCTCTCAGCCTCCAGAGGTACCCAGAAACGCCATAAAGCCTCTCTCACTTGAAAATATGGCTGCCGCAGTTTTGAAGCCTTCTTCTGTTAGATATTCAGATGTTGATTACTTTTGA 1884 0.4374 MAVNGVSPLSEVQNSVSAIDSSPSSTFWTTRPSQSSLRTFRNLGVSFASYFTGQGDDYSTKPINNHKSCVIDRRHSYLDSDNVKHEELPNASKLYYNYGGKSDRLSLPENVESCFGKRSCAMEPFDISTNCDSGSSVFESGGSSSGADPIIKSYCHSEISFCPSPQSSFYSSPFYTEAKQSFSNTEFSEGVSVSDITDTSINSTPTLNNYLYRPHKTSDVRWEAIQAIRERDWLLEMRHFSVLKTLGRGDIGKVHLAELTGTGTYFAMKIMDKEELARRKKLPRLQTEREILQSLDHPFLPTLYAHFETERFACLVMEFCPGGDLHALRQRQPRKYFSEDAARFYVAEVLLALEYLHMMGIIYRDLKPENVLVREDGHIMLSDFDLSLRCPVNPTLVRSPSPYVDTRSSRYLTPPLCILPTCVMQPDCIQPACFAFTPRKRSAKSNKLKTRIEMHRRHQQRVTHLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGRTPFKGSATRATLLNVMSQPLSFPESPSVSFAARDLIRGLLVKEPLHRLAYRRGAAEIKQHPFFRNVDWALIRCSQPPEVPRNAIKPLSLENMAAAVLKPSSVRYSDVDYF 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01535 627 Gene3D Transferase(Phosphotransferase) domain 1 475 598 - -
Accr5g01535 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 361 373 IPR008271 GO:0004672|GO:0006468
Accr5g01535 627 Gene3D Phosphorylase Kinase; domain 1 238 323 - -
Accr5g01535 627 FunFam serine/threonine-protein kinase D6PK-like 475 598 - -
Accr5g01535 627 FunFam serine/threonine-protein kinase D6PK-like 324 391 - -
Accr5g01535 627 FunFam Serine/Threonine Kinase 238 324 - -
Accr5g01535 627 PANTHER FLIPPASE KINASE 1-RELATED 143 602 - -
Accr5g01535 627 CDD STKc_phototropin_like 238 598 - -
Accr5g01535 627 SMART serkin_6 240 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g01535 627 ProSiteProfiles Protein kinase domain profile. 240 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g01535 627 SUPERFAMILY Protein kinase-like (PK-like) 213 602 IPR011009 -
Accr5g01535 627 Pfam Protein kinase domain 241 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g01535 627 Pfam Protein kinase domain 477 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr5g01535 627 Gene3D Transferase(Phosphotransferase) domain 1 324 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01535 Accr-Chr5 41635643 41638401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01535 169 604 AGC Kinase Gene Family AT3G27580 64.795 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Accr5g01535 Pkinase 1.8e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01535 K08286 - gmx:100802402 743.806