Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01532 ATGATGGCGTCTTCATCAAGCTACAACTCTCCATGTGCGGCGTGCAAGTTTCTGAGAAGGAAGTGCATGCCGGACTGCATATTTGCGCCGTATTTTCCACCGGAAGAGCCACAAAAATTCGCCAACGTTCACAAGATATTCGGAGCAAGCAACGTGAGCAAGCTCCTGAACGAAGTGCTGCCACATCAGAGAGAAGATGCAGTGAACTCTCTGGCTTATGAAGCCGAGGCTCGTATCAAAGATCCAGTGTATGGCTGTGTTGGAGCCATCTCTGTGCTCCAGAGACAAGTCATTAGGCTCCAAAAGGAACTTGATGCCACTAATGCTGAAATGATTCGCTACACTAATACTTGCACTGAAATTATTCCCACTCATCATCATCATCACGATGCTGCAACTAGAATGTTGGGTAATAATGAAGGACCTGATGTGGGAGGTTCGTCGTCGTCTCTTCTTGCTCAATCTCCTTCTTCTGCTGCTTTTTACTATCCTTCTCCCTGGAATAATGATCTTTCTGGCGATGCCTTTCACCACATTCACTGA 543 0.4659 MMASSSSYNSPCAACKFLRRKCMPDCIFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVLPHQREDAVNSLAYEAEARIKDPVYGCVGAISVLQRQVIRLQKELDATNAEMIRYTNTCTEIIPTHHHHHDAATRMLGNNEGPDVGGSSSSLLAQSPSSAAFYYPSPWNNDLSGDAFHHIH 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01532 180 MobiDBLite consensus disorder prediction 129 151 - -
Accr5g01532 180 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Accr5g01532 180 Coils Coil 90 117 - -
Accr5g01532 180 Pfam Lateral organ boundaries (LOB) domain 11 107 IPR004883 -
Accr5g01532 180 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01532 Accr-Chr5 41570377 41570919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01532 1 114 AS2 family AT5G63090 85.965 1.08e-70 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Accr5g01532 LOB 5e-42 No_clan