Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01523 ATGCTCTCTCTGCAATTCATCGCCCCCGGAGCTCTCGATCGTCCTTTGCCATTGCTACCGGGCGGCAATTCGTCGTCATTTTGGGCCAAGGATCGGTGCTTGCTCAAAGCAAGTCCTTCAATTGCTGGTAGAAATAACCTTCGATTCAATGGTGGAACTGTTAGGGTTTTGGCAATGTCTGGGGATTCTTCTGCATTCAAGATGAATCTAAACGAGTACCTGGTCACTCTGGAAAAACCACTTGGTATCCGGTTCGCTGTCACTGCTAACGGAAAAATCATCGTTCACTCCCTTAAGAAAGGGGGTAATGCAGAGAAGTCAAGAATTATAATGGTCGGGGACACTTTGAAGAAAGCTGGTGACTCATCACAAAATAGGCTTGCTGAGATTAAAAACGTTGAAGATGCGCAGAATATTTTGAAGGAGCAAACTAATCCTTTAAGCATGGTTCTTGAGAGGCCCAGATCTCCTTTTCCTATTCATCTACTGCACAAGCCGTCTGTTGAAAGCTCTGGGAATAGTGGTTTTTCTACCTTCAACGAAAAGTTTCTAACTCCAAAAGGAAGCGAGTTATTGGGCAATCCAAATGAACATGTCATCCTCAATGAGGAGATAAAATTCTTCAGTGATGAAGAGAATAACGAAGGAGAGTGGGCTCATGGAAGTTTCCCACTTGAGGAGTATGTCAAAGCTCTAGATCGTTCAAAAGGCGAGATGTACTATGATCACTCCCTTAGTATGCGCTACACTAAGATTTCAGAGCAAATATATGTGGGATCATGTATTCAAACGGAAGCTGATGTGGAAACATTGTCAAAGGTTGAGGGAGTCACTGCTGTTCTGAACTTCCAAAGTGCAACTGAAGCTGAGAATTGGGGAATCGATTTCAGAGCTATTAATGAATCATGTCAAAAGAATAATATCCTCATGATAAGCTATTCTATACGGGCAGGGGATTCTTATGATATGAGGAAGAAATTACCATTTTGTGTAGGGCTTCTCTTTCGGCTGCTGAGGAAAAGCCACCGCATTTTTGTTACATGTACCTCTGGATTTGATCGATCTCCTGCTTGTGTGATTGCATACCTGCACTGGATGACAGATCTTTCCCTCCATGCAGCTTATACATGGATCACTGGGATGTACACATGCAGGCCTGACAGGCCAGCAATTGCCTGGGCAACATGGGATCTTATAGCTATGGTTGAAAAGGGTAACCATGATGGACCCCCTACACATGCTGTCACATTTGTATGGAATGACAATGAGGGGAAGGATGTAACATTGGTGGGAGATTTTACTGGAAATTGGAAAGAACCAATCAAAGCAATGCACAAGGGTGGAATGAGATATGAAGCGGAAGTAAAACTTCCTCAAGGAAAGTACTACTATAAGTTTATTGTTGATGGAAACTGGAGGCATTCAACTGCTTCACCGGCAGAAAGGGATGACAGTGGGAACGTTAACAACGTAATTGTGATTGGTGATACTGCTAGTGTTATGCCTTCTGTTCAACACCAGCCAAAAGATGCCAACGTTGTGAAAGTGATCGAGAGGCCTCTGGATGAAAAAGAGCGGTTTAAGCTGGCGAAAGCAGCTCGCTGCATTGCTTTCAATGTGTGTCCTATTACGTTGACTCCCAAGTCGCAAGTAGTTGCATAG 1662 0.4368 MLSLQFIAPGALDRPLPLLPGGNSSSFWAKDRCLLKASPSIAGRNNLRFNGGTVRVLAMSGDSSAFKMNLNEYLVTLEKPLGIRFAVTANGKIIVHSLKKGGNAEKSRIIMVGDTLKKAGDSSQNRLAEIKNVEDAQNILKEQTNPLSMVLERPRSPFPIHLLHKPSVESSGNSGFSTFNEKFLTPKGSELLGNPNEHVILNEEIKFFSDEENNEGEWAHGSFPLEEYVKALDRSKGEMYYDHSLSMRYTKISEQIYVGSCIQTEADVETLSKVEGVTAVLNFQSATEAENWGIDFRAINESCQKNNILMISYSIRAGDSYDMRKKLPFCVGLLFRLLRKSHRIFVTCTSGFDRSPACVIAYLHWMTDLSLHAAYTWITGMYTCRPDRPAIAWATWDLIAMVEKGNHDGPPTHAVTFVWNDNEGKDVTLVGDFTGNWKEPIKAMHKGGMRYEAEVKLPQGKYYYKFIVDGNWRHSTASPAERDDSGNVNNVIVIGDTASVMPSVQHQPKDANVVKVIERPLDEKERFKLAKAARCIAFNVCPITLTPKSQVVA 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01523 553 Gene3D Protein tyrosine phosphatase superfamily 241 506 IPR029021 -
Accr5g01523 553 Gene3D - 73 154 IPR036034 GO:0005515
Accr5g01523 553 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC 56 545 - -
Accr5g01523 553 CDD DSP_laforin-like 247 393 IPR045204 GO:0019203
Accr5g01523 553 CDD E_set_AMPKbeta_like_N 415 494 - -
Accr5g01523 553 Gene3D Immunoglobulins 402 498 IPR013783 -
Accr5g01523 553 SUPERFAMILY E set domains 412 495 IPR014756 -
Accr5g01523 553 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 242 379 IPR029021 -
Accr5g01523 553 SUPERFAMILY PDZ domain-like 76 172 IPR036034 GO:0005515
Accr5g01523 553 ProSiteProfiles PDZ domain profile. 74 155 IPR001478 GO:0005515
Accr5g01523 553 Pfam Glycogen recognition site of AMP-activated protein kinase 415 496 IPR032640 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01523 Accr-Chr5 41487333 41492875 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01523 139 549 Protein tyrosine phosphatase (PTP) family AT3G01510 60.667 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01523 - - gmx:100814503 802.742