Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01513 ATGATGGAACTCACCGATTCCGGCGACGAACTCAGCGACCACAAGCTGCCTCAAGATTCTCGTTCTGGACTCGGAATCGACCTCAATGAGATCCCCTCTCCTTCTTTTGCCGAAACCCTACCGGACTCCATCGACATCGTACGCGCGTACCACGAGAACCCGGCCCCTCCGCCTGGCGGCCCGGCTGGGATTCCCGGTGACGTCCGCGGCTCTACTTGTGGTGCCTGTGGTAAGCCCGAGGCGCGGGGTCATGTTGTGGTCTGCGACGGGTGCGAGCGCGGCTACCATTTGGGCTGCGCGGGAATGCGTGGGCGCCAGGCCGTAAACATCGACGAATGGGTTTGTGGAGAGTGCGTGTCCAGCGGGGTCAAGAGTAAGCGTTGGCCATTGGGTGTCAAGTCCAAGCATCTTTTGGACATCAATGCTTCGCCACCCAGCGATGCCGACGGCGAAGGTAGTGAAGAATTGCAGGATATGAGAAAGCACACTCAGGGTCATAATTCTTTCAGTGCCAACTCATTTGGCGCCCCATTGACATATTCAACCTTCTTCAATGGTAATGCTATTGGCTTCCAAAAAGCATCTGGAGTTGTGACACATGCTGTTAGAGTGGGTTTTGAGGATGTGTTGAATCATACGCATTCAGTGACTAGAAATTTTGAGGAGGTAGATATGGGTTTGCCTCCTGGAAGGCATAGGAATAGTAAAAATACAGCTAGCGGGAATCCAGGAGATGCAATTTTGCAAGCTCTCAGAGATTTTATATCTGAAAGGCATGGTGTTCTGGAGGAAGGCTGGAAAGTGGAGTTTAGACAACCAATGGGCAACTCTGAGCTGTATGCTGTTTACTGTGCACCAGATGGAAAGATTTTTGATTCTGTGTTTGAAGTAGCGTGTTATCTGGGGTTAATGCCTGGCTACAACTCTTTGGAGTCTGAAATGAGAAACAATAGGGCTGTCTCTTCATTAGGTGGGTCACATTTAACCAGGAAAAGAAAGTCAGCTAGACTCCCAGTCCCTAATGGCTTTGCTGAGAGAAGGGAAAGCTTTGCCAATAGTTGTTTTAAAGATCCTCCTTTGGATGCTGCAAGTGCAGAGTGTGCTAATGCATGTGGGAACATATCAGAAGCCACATTGAGTATAAGGAGAGAGGACGATCACTCTGGCCCTCAGCAATCTGCCGATGGCCTTCCTTTACAGTTTGAAGATTTTTTTGTTCTTTCTTTGGGGAAGGTTGATGACAGACCTTCATATTGTGATGCTAACATTATTTGGCCCGTAGGTTATAAATCTTGCTGGCACGATCAAATTACAGGCTCCATTTTTACATGTGAAGTTCTGGATGGTGGTGATTCTGGACCTATATTTAGGGTCAGAAGGTGTTCCTGTTCTGATTTTTCTATTCCAGTTGGGTCAACCATCCTCTCATTGTCAAACCCTTGTCAATTTGTGAGTCAAACCAATGAAGGTGAGGGAAAGATGAATGATAATTTGGAATGTGATGATGATGAAAGTATCCAGATGATCCTGGACGATTCTTGCAATCCAACAGAAAATGATATCTTGAGTTGTCTTGAAAGTTGCTCTAGTGAAGCACATGATAGCCATAGATTGGATGTATCGCAGTCTGCAGCTGGTCCAGTTCAAGAGGAAACTCATAATTTGTCTGATGACTTGGGGTCAATTGGTGAGATTATGGTTGAACAGTGTTCATCATCCTCAGCATGGAAGGATATTTCCCAAAAATTAGTGAATGCTTGCAGTGAAATATGCAAGCAGAAAGGGACTCTAAAGCTCTATTGTAAACATGCTGGAAATGAAACATGCGTATATAAATGGAACATAAGGAATGGCAAAAATGAAACACACCCCACTTCATTTGCTAAATTTTGTGGGTCCCCTGCTCTTGGTATCCCTGCCATGGTTCAGGCAGATGATGATCTTGAAAGTTTGAATGAGGTCTTAGGAAAATGGTTGGAGCAGGATAGATTTGGGTTAGATGTTGAGTTTGTCCAAGAAGTGCTCGAGCTACTCCCTGGTGTTGAAGGATTCTCACGGTATGAATTTCTGAATACTAGAAGTAATGGCTCTTCCTTGCTAACAGTTGGAAATGGGTTCTTAGTGGCTGATTGGAGAGACAGATCCCAATATCAGGAAGAAGCAGTGCAAGGTTTATATAGGAGACACAAGAAAGTAAAATTGGCCAAAGAATGTGCTAAGGAAGATCGCTGTCCTCCTCCTGGGAAGCCACTATCCTCTAGGGTTCCTTTCGAACTTGTTGGTGATGTTTTTCAGGCTTGGGAGCTATTATGCAGATTTCATGAAATTTTGGGCCTGAAGGAACCTTTGTCATTGGATGAGCTAGAGAAAGAACTTGTTAACCCATGGTTTAATGGATCAGTCGTTAGTGAAAAACCTGAGGGAGATGGCAGTGGTGGACCAATATTATCCCCAAACTGTGAAGCTGCTCCTTCAGTTTCTGCTGAAAGTCCCCATGCATTTATTCAAGTGGAAACTGAAGCCATGAAAGAGGCAGCTCAAGTTAAGCTTGCATCTTTAACTTACACCAGATGCTTTGGTGCATCTTTGACAAAGGCTCATAATTCCCTGCTGGAGGTTTTAATAGGTGAACTTCAATCCAAAGTGGCTGCCCTGGTGGATCCAAATTTTGATCCTGGAGAGCTGAGAACAAGACGTGGAAGAAGGAAAGACATAGATAATGCTGTTCCTGCCAGACGAGCCAAGCTCAATATGCTTCCTATTAATGAACTAACTTGGCCTGAATTGTCTCGTAGATACATATTAGCTTTCTTATCAATGGATGGTAACCTTGAGTCACCAGAAATTACTACACGGGAAAGTGGCAAAGTATTTCGTTGCTTACAAGGCGATGGTGGTTTGCTGTGTGGCTCCCTTACTGGTGTGGCTGGGATGGAAGCAGATGCATTGTTGCTTGCGGAGGCTACAAAGAAAATTTTTGGTTCTATGAGCAGTGGAAGTGATGTGCTTACCTTTGAAGATGAGGAGTCAGATGCAAAGGATGCTTGTGAGAAAACTCCGGCGAATGATGGTAATATTCCTGAATGGGCACAGCTTCTGGAACCGGTAAGAAAACTACCTACAAATGTGGGAACCAGAATCAGAAAGTGTGTCTATGATGCCTTACTTAAGGATCCACCAGAGTGGGCTAGGAATATACTACAACACTCAATTAGTAAGGAAGTGTACAAGGGCAATGCATCTGGACCTACAAAGAAAGCAGTTCTTTCTGTGTTGGCTGATGTATGTGGTGAAGCACCGCAACAGAAGCCCAGTAAAGCAAGGAGAAAAAAGACTGTAATATCTATTTCTGACATTATCATGAAACAATGTCGCATTGTATTACGCCGTGCCGCTGCTGCAGATGATTCCAAGGTTTTTTGCAATTTGTTGGGACAAAAATTAATAAATTCTTCTGATAATGATGATGAAGGGCTTCTTGGATCTCCAGCCATGGTATCTCGTCCTCTTGACTTCAGGACCATTGACCTACGATTGGCTGCTGGGGCTTATGGTGGATCTCATGAGGCTTTTCTTGAGGATGTTCATGAGCTGTGGAACAATGTTCATATTGCTTTTGGGGATCAACCTGATTTAGTTGAGCTGGCTGATAAATTATCCGAGAATTTTGAATCGTTGTATGATAGTGAGGTTTTAACTTATGTGCAAAGGTTTCGAGAGTATGCCAAATTGGGAAACTTAAGTGCTGAAATGAGAAAAGAAGTAGAAAATTTTCTTGCATCAACTAGTGAAATTCCGAAGGCCCCTTGGGATGAGGGAGTCTGTAAAGTATGTGGCATTGATAGGGATGATGACAGTGTTTTGCTATGTGATACCTGCGATGCTGAGTATCATACTTATTGCTTGAATCCTCCGCTAGCAAGGATCCCTGAAGGAAACTGGTACTGCCCTTCTTGTGTTGACAATAGGCATGCTGTTCAAGATGTTTCACAATGTTCAAAACTTATTGGCAAACCTAGAAGTAAAAAATTCAAGGGGGAGGTTACTTCGCTTTACTTGGAGGCTCTTTCACATCTACTATCTGTAATGGAAGAGAAAGAATACTGGGAGTACAGTGTGGGCGAGAGAACTATCCTACTCAAGTTTTTATGTGACGAGTTGCTAAACACTTCCCTCATACGCCAGCACCTTGAGCAATGTGCTGAGTCATCTGCTGAATCACATCAGAAGTTGCGCGCACTCTCTGCAGAGTGGAAAAGCCTGAAAATTAAAGAAGAGATATTATCTACTAAAGCTGCAAAAATTGACACATGCTCAGTGGTAACTACTGAAGAAGTCCCCAAGGAGGGGCTTCCTGGATCACTATCAAATCATGGTAAATGCCTGGTTCGGCCAGCTAACAATTTTGGGGTATTTGCTGATGGTTTGCATTCGGAAGAAATAAATAGAGAGAAAAATGGGTTTAACAGAGTTGATAAAAGTGTCTCTGCAACAAATTCAGAGACTGATAGTCAAAACAGGAATCCCATAAATATGGAAGGACAGTTGAAGAATGTCTCTGCAGCTGTGGATAGCAGTCAGTTGCCTACAAATATGACTTCCTGTGTGGATTCTCAGTGTAGTGACAAGTCTACTAATCCTTTTTCGATAGCAAATAATATGCCTCAAGAAATTAACAGCTCTGGTGGAGCAGTTCATATCCAGGGTAACCGGCAGAAATGTGTGGGAGGAGATGAATCTCTTGATCTGCACGAACAAGGTGTTCCTTTTGATGTTCCCAAGTCTGCTGTAAATGAATCAGAACAATATCACCTCGAGCTCAATGCTATCAGACATGATATCTCACTTCTTCAAGAGTCAATAACTAGTATTGAATCACAGCTACTAAAGCTCTCTGTACGTCGGGAATTTTTGGGAATTGATTTGCTTGGTCGCTTCTACTGGGCTTCAGTAATGCCTGGTGGAAGTCCGTGTATACTTGCTGATTCAACTTCTCTGATGTTGCATGAGGGAAGAATGAACAATAGCAGAGACCCAGTGGACAAGATTTCTGCTATGAAGAATTGTGCTCTATCCGGCAAGGATACCTATCAGACGTTAGGGCTGATGAAAGATTTATCTTCTTTAATGTCTCTACCAAGAAATACTGTAGGCTGTAATTTACCATGGGTTGTTTATCAAACTGATGCTGAAATTGAAGAGCTCTTATGTTGGCTGAAGGATATTGACCCGAGAGAAAGAGAACTTAAAGATTCGATTATGATTTGGCAAAAATCAAGATTCCAAGAGCTTATTCATATTCAGAATGAAGATCAAGTTGAGCCCCAAGGATCTTCTCCTTTGCTAGGGGATAGAGAGAGAATTGTGTCTGATTCTCTTGTTACAAAGGCAACCTCCTTGATAGAGAAGAAATATGGCCCATTTTTAGAGCTGGGTACCCTTGAGGCATTGAAGAAGCGGGGTAAAAAGGTAAGAACATCTAATGATGATAAGTTGTGTAGGTGCCAATGCCTAGAACCTATATGGCCTTCTAGGCAACACTGCATTTCTTGTCACAAAACCCTTTTGAATGATGTTGAACTGGAGGGACACAATGATTGCAAATGTAGTGCTGCTTTGCCTACCTCAGAGAAAAATAAAGATACCAGTGGATCTTCTAAAGGGAGAGGTAATGTGAAATTTGAGACCACCCATGGAAAAGTCAGAGGTAATGCTGAAACAGGTGGAACCTCAACAAATGGAGGTTCTGAGCTTAGCTCGAGATTGATTAAGTTTTCGAATCAAGACTCAACATGTCCGTATAACTTTGAAGATGTCTGTTCCAAGTTTGTGACTGAAGACTCCAACAAGGAACTTATCAAAGAAATAGGTCTCATTGATTCAAATGGGATCCCATCCTTTGTTCTTTCTGTATCTCCTTATGTAAGTGATTCTACAGTTATGCTAATATCAAACAAAAAGGATGAATATGTTGCTGGTGGGTCAAAGGCTTCTGAGGGGCAGATTCCTGAAGGAAATGAGGGAAGTGGCATGTGTCATGACCATATATCAGGAATTCCTATTCGAAGTTCCAATGTGAATGAAAACAATAAAGCAGGAAAATCCAGTAGATCAACTTTGGGATCTTCAGGACAAAGGGATGGAAAATCTTTATTTTCTGTTCCTGCTTCACAAGTGGGCACTGACAGTTGCTGTGTGGTACCTCAATCTTCTTTGAGACCATTGGTTGGAAAAGTTTCCCATATTTTGAGGCTACTGAAGATTGGTCTACTTGATATGGATGCTGCACTCCCCGAAGTTGCTTTGAGGCCATCAAAAGCACAATTGGAAAGAAGACAGGCTTGGCGTGCATTCGTTAAATCTGCTAGGACTATATATGAGATGGTTCAGGCGACAATCACACTGGAGGACATGATTAAGACTGAGTACTTAAGAAATGACTGGTGGTACTGGTCGTCACTCTCAGCCGCTGCCAAATCTTCTACTTTGTCATCCCTCGCCCTTCGAATATACACCCTTGATTCAGCTATTATGTATGAGAGAATGTCAAGTTCAAGTTTTACTGATTGCTTGGAACCTTCTGTGGTAACAGAACAGAAAGCGTCAGCCACTTTGGATGCAGAAAAATCCAAAGCAATACGGAAGTCAAGCAGGAAAAGGAAGGAACCAGATGGTTAA 6678 0.4311 MMELTDSGDELSDHKLPQDSRSGLGIDLNEIPSPSFAETLPDSIDIVRAYHENPAPPPGGPAGIPGDVRGSTCGACGKPEARGHVVVCDGCERGYHLGCAGMRGRQAVNIDEWVCGECVSSGVKSKRWPLGVKSKHLLDINASPPSDADGEGSEELQDMRKHTQGHNSFSANSFGAPLTYSTFFNGNAIGFQKASGVVTHAVRVGFEDVLNHTHSVTRNFEEVDMGLPPGRHRNSKNTASGNPGDAILQALRDFISERHGVLEEGWKVEFRQPMGNSELYAVYCAPDGKIFDSVFEVACYLGLMPGYNSLESEMRNNRAVSSLGGSHLTRKRKSARLPVPNGFAERRESFANSCFKDPPLDAASAECANACGNISEATLSIRREDDHSGPQQSADGLPLQFEDFFVLSLGKVDDRPSYCDANIIWPVGYKSCWHDQITGSIFTCEVLDGGDSGPIFRVRRCSCSDFSIPVGSTILSLSNPCQFVSQTNEGEGKMNDNLECDDDESIQMILDDSCNPTENDILSCLESCSSEAHDSHRLDVSQSAAGPVQEETHNLSDDLGSIGEIMVEQCSSSSAWKDISQKLVNACSEICKQKGTLKLYCKHAGNETCVYKWNIRNGKNETHPTSFAKFCGSPALGIPAMVQADDDLESLNEVLGKWLEQDRFGLDVEFVQEVLELLPGVEGFSRYEFLNTRSNGSSLLTVGNGFLVADWRDRSQYQEEAVQGLYRRHKKVKLAKECAKEDRCPPPGKPLSSRVPFELVGDVFQAWELLCRFHEILGLKEPLSLDELEKELVNPWFNGSVVSEKPEGDGSGGPILSPNCEAAPSVSAESPHAFIQVETEAMKEAAQVKLASLTYTRCFGASLTKAHNSLLEVLIGELQSKVAALVDPNFDPGELRTRRGRRKDIDNAVPARRAKLNMLPINELTWPELSRRYILAFLSMDGNLESPEITTRESGKVFRCLQGDGGLLCGSLTGVAGMEADALLLAEATKKIFGSMSSGSDVLTFEDEESDAKDACEKTPANDGNIPEWAQLLEPVRKLPTNVGTRIRKCVYDALLKDPPEWARNILQHSISKEVYKGNASGPTKKAVLSVLADVCGEAPQQKPSKARRKKTVISISDIIMKQCRIVLRRAAAADDSKVFCNLLGQKLINSSDNDDEGLLGSPAMVSRPLDFRTIDLRLAAGAYGGSHEAFLEDVHELWNNVHIAFGDQPDLVELADKLSENFESLYDSEVLTYVQRFREYAKLGNLSAEMRKEVENFLASTSEIPKAPWDEGVCKVCGIDRDDDSVLLCDTCDAEYHTYCLNPPLARIPEGNWYCPSCVDNRHAVQDVSQCSKLIGKPRSKKFKGEVTSLYLEALSHLLSVMEEKEYWEYSVGERTILLKFLCDELLNTSLIRQHLEQCAESSAESHQKLRALSAEWKSLKIKEEILSTKAAKIDTCSVVTTEEVPKEGLPGSLSNHGKCLVRPANNFGVFADGLHSEEINREKNGFNRVDKSVSATNSETDSQNRNPINMEGQLKNVSAAVDSSQLPTNMTSCVDSQCSDKSTNPFSIANNMPQEINSSGGAVHIQGNRQKCVGGDESLDLHEQGVPFDVPKSAVNESEQYHLELNAIRHDISLLQESITSIESQLLKLSVRREFLGIDLLGRFYWASVMPGGSPCILADSTSLMLHEGRMNNSRDPVDKISAMKNCALSGKDTYQTLGLMKDLSSLMSLPRNTVGCNLPWVVYQTDAEIEELLCWLKDIDPRERELKDSIMIWQKSRFQELIHIQNEDQVEPQGSSPLLGDRERIVSDSLVTKATSLIEKKYGPFLELGTLEALKKRGKKVRTSNDDKLCRCQCLEPIWPSRQHCISCHKTLLNDVELEGHNDCKCSAALPTSEKNKDTSGSSKGRGNVKFETTHGKVRGNAETGGTSTNGGSELSSRLIKFSNQDSTCPYNFEDVCSKFVTEDSNKELIKEIGLIDSNGIPSFVLSVSPYVSDSTVMLISNKKDEYVAGGSKASEGQIPEGNEGSGMCHDHISGIPIRSSNVNENNKAGKSSRSTLGSSGQRDGKSLFSVPASQVGTDSCCVVPQSSLRPLVGKVSHILRLLKIGLLDMDAALPEVALRPSKAQLERRQAWRAFVKSARTIYEMVQATITLEDMIKTEYLRNDWWYWSSLSAAAKSSTLSSLALRIYTLDSAIMYERMSSSSFTDCLEPSVVTEQKASATLDAEKSKAIRKSSRKRKEPDG 2225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01513 2225 SUPERFAMILY FYVE/PHD zinc finger 71 130 IPR011011 -
Accr5g01513 2225 Pfam Methyl-CpG binding domain 253 305 IPR001739 GO:0003677
Accr5g01513 2225 ProSitePatterns Zinc finger PHD-type signature. 1275 1319 IPR019786 -
Accr5g01513 2225 ProSiteProfiles Zinc finger PHD-type profile. 1272 1322 IPR019787 -
Accr5g01513 2225 ProSiteProfiles Zinc finger PHD-type profile. 70 121 IPR019787 -
Accr5g01513 2225 SUPERFAMILY DNA-binding domain 253 307 IPR016177 GO:0003677
Accr5g01513 2225 ProSiteProfiles Bromodomain profile. 1165 1213 IPR001487 GO:0005515
Accr5g01513 2225 SMART PHD_3 1274 1320 IPR001965 -
Accr5g01513 2225 SMART PHD_3 72 119 IPR001965 -
Accr5g01513 2225 MobiDBLite consensus disorder prediction 2202 2225 - -
Accr5g01513 2225 Pfam Bromodomain 1163 1217 IPR001487 GO:0005515
Accr5g01513 2225 ProSitePatterns Zinc finger PHD-type signature. 73 118 IPR019786 -
Accr5g01513 2225 Gene3D - 1116 1232 IPR036427 GO:0005515
Accr5g01513 2225 Pfam PHD-finger 73 120 IPR019787 -
Accr5g01513 2225 Pfam PHD-finger 1274 1320 IPR019787 -
Accr5g01513 2225 CDD PHD_SF 72 118 - -
Accr5g01513 2225 ProSiteProfiles FYR domain FYRN motif profile. 396 449 IPR003888 GO:0005634
Accr5g01513 2225 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1233 1333 IPR013083 -
Accr5g01513 2225 MobiDBLite consensus disorder prediction 1874 1917 - -
Accr5g01513 2225 SUPERFAMILY Bromodomain 1109 1228 IPR036427 GO:0005515
Accr5g01513 2225 MobiDBLite consensus disorder prediction 1903 1917 - -
Accr5g01513 2225 CDD PHD1_Lid2p_like 1274 1319 - -
Accr5g01513 2225 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 66 138 IPR013083 -
Accr5g01513 2225 PANTHER OS02G0192300 PROTEIN 12 2221 - -
Accr5g01513 2225 MobiDBLite consensus disorder prediction 2023 2047 - -
Accr5g01513 2225 Gene3D - 397 523 - -
Accr5g01513 2225 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 1354 1398 IPR028942 -
Accr5g01513 2225 MobiDBLite consensus disorder prediction 1 25 - -
Accr5g01513 2225 MobiDBLite consensus disorder prediction 2204 2225 - -
Accr5g01513 2225 SUPERFAMILY FYVE/PHD zinc finger 1260 1325 IPR011011 -
Accr5g01513 2225 MobiDBLite consensus disorder prediction 1875 1892 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01513 2 2225 C2H2 Transcription Factor Family AT3G01460 45.678 0.0 1796
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Accr5g01513 Bromodomain 6.8e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01513 K22768 - gmx:100820223 2852.77