Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01512 ATGGAATTCATTTTATACGTGATATTGCTATTTGTGGGGTTAGGGGTCTTGATCCTACTTCATGTCTGTTTAATAATGATAGAATCCAGAAGAAGAGGCAGAGGCACAACGATGGAGAGTGAAACCACCGATGAAGCACGAAGCATGTCAAAAGATGAACTAGAACAGCTTCCTTGTTATGATTATGCAGCCAAAGAGAGTGAAACTAGTACTGTGGAATGTGCAGTGTGCTTGGAGAATCTGGCTACAGGGGATAAGTGCAGATTATTGCCTACGTGCAAGCACAGTTTTCATGCCCACTGTTTGGATCAATGGCTTCCTCAGACACCCATTTGCCCTATTTGCAGGGCCAGTGTTGACTCTCAGAGGGAATTCTTTGCTATAGATATAAATCAGAATGGCCATTTTGAGCCAAACAGTAGACAGTTGAGAGAAAGCCCAGAAACTTGTTTTACAGTGCAGTTCACAGAGAATTCAACTCCACAAGGTTAG 492 0.4268 MEFILYVILLFVGLGVLILLHVCLIMIESRRRGRGTTMESETTDEARSMSKDELEQLPCYDYAAKESETSTVECAVCLENLATGDKCRLLPTCKHSFHAHCLDQWLPQTPICPICRASVDSQREFFAIDINQNGHFEPNSRQLRESPETCFTVQFTENSTPQG 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01512 163 SUPERFAMILY RING/U-box 73 126 - -
Accr5g01512 163 Pfam Ring finger domain 73 116 IPR001841 -
Accr5g01512 163 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 3 131 - -
Accr5g01512 163 ProSiteProfiles Zinc finger RING-type profile. 74 116 IPR001841 -
Accr5g01512 163 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 48 125 IPR013083 -
Accr5g01512 163 SMART ring_2 74 115 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01512 Accr-Chr5 41350145 41350636 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01512 45 119 C3H Transcription Factor Family AT1G74410 42.667 7.13e-19 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01512 - K15692 lang:109353575 150.984