Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01497 ATGTCGCAGGGCTATGCTATTGAGCTTTACTTCGACCCTGCGCTTGAAAACCAGGTCTTGAAGGCCTGGAATGTACTGGCTCGCCGACAAATCAGTACCCAACTCATCGAAATTGAGTCGCGCCCCCACATCACTCTTTTCTCAAGCCAATTCATTGATCCTATCAAGCTTGAATCCATTATCAGGAATTTCGCAGCCAAGCTTGAATCTCTGCCTCTATCTTTCTCTTCCATTGGTACCCTACCGAATGACAGCAATGTCCTTTTTCTTGCACCCACGCCCTCAACTTCGCTACTCCAGTTCCAATCGCAATTGTGTGATGCATTGAAGAAAGAAGGCGTTGAGATAGGTGAGGAATATCGCCAGGATTCTTGGATTCCTTATTGTTCGGTTGCGCAGGAATTGCCAAAATCTAGGATGGCTGAGGCATTCTGTGTCTTGCGAGACTTAAAATTGCCAGTAAGTGGGTATGCTACGGATATTGGACTGGTGGAGTTCTCGCCTGTTCGTGAGCTCTTCTCATATGTGCTGGGAAACACAGCAGAAACTTAA 552 0.4674 MSQGYAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSQFIDPIKLESIIRNFAAKLESLPLSFSSIGTLPNDSNVLFLAPTPSTSLLQFQSQLCDALKKEGVEIGEEYRQDSWIPYCSVAQELPKSRMAEAFCVLRDLKLPVSGYATDIGLVEFSPVRELFSYVLGNTAET 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01497 183 Pfam 2'-5' RNA ligase superfamily 41 164 - -
Accr5g01497 183 SUPERFAMILY LigT-like 4 166 IPR009097 -
Accr5g01497 183 Gene3D Cyclic phosphodiesterase 5 177 - -
Accr5g01497 183 PANTHER - 1 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01497 Accr-Chr5 41097199 41097750 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01497 1 183 Calmodulin-binding Proteins AT5G40190 72.678 2.82e-93 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01497 - - cave:132181051 318.931